Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_000075

Experiment: D-Glucose-6-Phosphate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate (C)
86,694	+		ABIE53_000074	0.46	+3.7
86,694	+		ABIE53_000074	0.46	+4.2
86,694	+		ABIE53_000074	0.46	+3.1
86,694	+		ABIE53_000074	0.46	+3.0
86,695	-		ABIE53_000074	0.46	+4.0
86,695	-		ABIE53_000074	0.46	+3.5
86,794	+		ABIE53_000074	0.51	+3.5
86,829	+		ABIE53_000074	0.53	+3.3
86,830	-		ABIE53_000074	0.53	+4.2
86,830	-		ABIE53_000074	0.53	+3.6
87,042	+		ABIE53_000074	0.65	+3.9
87,042	+		ABIE53_000074	0.65	+3.8
87,042	+		ABIE53_000074	0.65	+3.8
87,042	+		ABIE53_000074	0.65	+4.2
87,042	+		ABIE53_000074	0.65	+3.0
87,042	+		ABIE53_000074	0.65	+5.2
87,042	+		ABIE53_000074	0.65	+3.5
87,043	-		ABIE53_000074	0.65	+3.6
87,043	-		ABIE53_000074	0.65	+2.9
87,043	-		ABIE53_000074	0.65	+3.2
87,043	-		ABIE53_000074	0.65	+3.4
87,043	-		ABIE53_000074	0.65	+4.1
87,043	-		ABIE53_000074	0.65	+3.3
87,043	-		ABIE53_000074	0.65	+4.5
87,043	-		ABIE53_000074	0.65	+2.8
87,123	+		ABIE53_000074	0.69	+4.4
87,123	+		ABIE53_000074	0.69	+3.8
87,123	+		ABIE53_000074	0.69	+3.2
87,123	+		ABIE53_000074	0.69	+4.1
87,123	+		ABIE53_000074	0.69	+3.6
87,123	+		ABIE53_000074	0.69	+3.9
87,123	+		ABIE53_000074	0.69	+4.4
87,124	-		ABIE53_000074	0.69	+3.2
87,124	-		ABIE53_000074	0.69	+3.1
87,124	-		ABIE53_000074	0.69	+4.4
87,124	-		ABIE53_000074	0.69	+3.9
87,124	-		ABIE53_000074	0.69	+2.5
87,124	-		ABIE53_000074	0.69	+3.2
87,124	-		ABIE53_000074	0.69	+3.1
87,124	-		ABIE53_000074	0.69	+3.3
87,333	+		ABIE53_000074	0.81	+3.5
87,333	+		ABIE53_000074	0.81	+4.0
87,333	+		ABIE53_000074	0.81	+4.2
87,333	+		ABIE53_000074	0.81	+3.6
87,333	+		ABIE53_000074	0.81	+3.7
87,333	+		ABIE53_000074	0.81	+3.8
87,334	-		ABIE53_000074	0.81	+3.2
87,334	-		ABIE53_000074	0.81	+3.7
87,334	-		ABIE53_000074	0.81	+3.5
87,334	-		ABIE53_000074	0.81	+3.3
87,334	-		ABIE53_000074	0.81	+2.7
87,334	-		ABIE53_000074	0.81	+3.6
87,334	-		ABIE53_000074	0.81	+3.5
87,351	+		ABIE53_000074	0.82	+4.7
87,351	+		ABIE53_000074	0.82	+3.9
87,351	+		ABIE53_000074	0.82	+3.4
87,351	+		ABIE53_000074	0.82	+3.9
87,351	+		ABIE53_000074	0.82	+4.2
87,351	+		ABIE53_000074	0.82	+3.8
87,351	+		ABIE53_000074	0.82	+3.5
87,351	+		ABIE53_000074	0.82	+4.2
87,351	+		ABIE53_000074	0.82	+2.8
87,352	-		ABIE53_000074	0.82	+3.0
87,352	-		ABIE53_000074	0.82	+3.3
87,352	-		ABIE53_000074	0.82	+3.7
87,352	-		ABIE53_000074	0.82	+3.3
87,352	-		ABIE53_000074	0.82	+3.5
87,384	+		ABIE53_000074	0.84	+4.9
87,384	+		ABIE53_000074	0.84	+3.3
87,384	+		ABIE53_000074	0.84	+4.0
87,385	-		ABIE53_000074	0.84	+3.0
87,579	+				+3.7
87,579	+				+4.1
87,579	+				+4.2
87,579	+				+3.7
87,579	+				+2.8
87,579	+				+3.1
87,580	-				+2.7
87,580	-				+3.1
87,580	-				+3.5
87,580	-				+3.4
87,580	-				+3.3
87,580	-				+3.7
87,580	-				+3.3
87,679	+				+3.5
87,680	+				+2.9
87,680	+				+4.4
87,681	-				+3.1
87,681	-				+3.6
87,681	-				+2.8
87,681	-				+1.9
87,681	-				+3.2
87,734	+				+4.0
87,734	+				+3.2
87,735	-				+3.3
87,735	-				+3.2
87,886	+		ABIE53_000075	0.22	+3.7
87,886	+		ABIE53_000075	0.22	+2.9
87,886	+		ABIE53_000075	0.22	+2.9
87,886	+		ABIE53_000075	0.22	+3.3
87,886	+		ABIE53_000075	0.22	+4.6
87,886	+		ABIE53_000075	0.22	+3.3
87,886	+		ABIE53_000075	0.22	+2.6
87,886	+		ABIE53_000075	0.22	+3.2
87,886	+		ABIE53_000075	0.22	+2.7
87,886	+		ABIE53_000075	0.22	+3.6
87,887	-		ABIE53_000075	0.22	+3.0
87,887	-		ABIE53_000075	0.22	+3.4
87,887	-		ABIE53_000075	0.22	+3.1
87,887	-		ABIE53_000075	0.22	+3.2
87,887	-		ABIE53_000075	0.22	+3.6
87,966	+		ABIE53_000075	0.30	+3.1
87,966	+		ABIE53_000075	0.30	+3.1
87,966	+		ABIE53_000075	0.30	+3.5
88,120	-		ABIE53_000075	0.46	+3.8
88,321	+		ABIE53_000075	0.66	+2.0
88,321	+		ABIE53_000075	0.66	+3.3
88,321	+		ABIE53_000075	0.66	+2.9
88,322	-		ABIE53_000075	0.66	+3.3
88,651	+				+0.8
88,651	+				-1.1
88,651	+				-0.1
88,651	+				+1.4
88,651	+				+1.0
88,651	+				-0.7
88,651	+				+0.0
88,651	+				+0.5
88,651	+				+0.9
88,651	+				+2.2
88,651	+				+0.2
88,651	+				+0.6
88,651	+				-0.3
88,651	+				-0.5
88,651	+				+3.2
88,651	+				+1.4
88,651	+				+0.6
88,651	+				-0.2
88,651	+				+0.2
88,651	+				+1.2
88,651	+				+0.9
88,651	+				-0.6
88,651	+				-0.2
88,651	+				-1.2
88,651	+				-0.1
88,651	+				-1.0
88,652	-				+3.4
88,652	-				+3.1
88,652	-				+3.3
88,652	-				+3.3
88,652	-				+3.3
88,652	-				+3.6
88,652	-				+2.9
88,652	-				+3.5
88,652	-				+4.0
88,652	-				+3.7
88,652	-				+2.3
88,652	-				+3.2
88,652	-				+3.2
88,652	-				+3.3
88,652	-				+3.1
88,652	-				+3.4
88,652	-				+4.0
88,652	-				+3.6
88,652	-				+3.3
88,652	-				+1.8
88,652	-				+2.8
88,652	-				+3.1
88,652	-				+3.4
88,652	-				+2.9
88,652	-				+2.8
88,652	-				+4.1
88,652	-				+3.1
88,652	-				+3.8
88,652	-				+3.5
88,652	-				+3.3
88,652	-				+2.7
88,652	-				+0.9
88,657	+				+3.8
88,657	+				+4.2
88,657	+				+2.8
88,658	-				+3.1
88,658	-				+3.2
88,658	-				+3.3
88,658	-				+3.0
88,695	-				+3.3
89,165	+		ABIE53_000076	0.76	+3.1
89,165	+		ABIE53_000076	0.76	+3.2
89,165	+		ABIE53_000076	0.76	+3.7
89,165	+		ABIE53_000076	0.76	+3.4
89,165	+		ABIE53_000076	0.76	+3.9
89,165	+		ABIE53_000076	0.76	+3.4
89,165	+		ABIE53_000076	0.76	+2.4
89,165	+		ABIE53_000076	0.76	+3.5
89,165	+		ABIE53_000076	0.76	+3.3
89,165	+		ABIE53_000076	0.76	+3.3
89,166	-		ABIE53_000076	0.76	+2.8
89,166	-		ABIE53_000076	0.76	+3.3
89,166	-		ABIE53_000076	0.76	+3.5
89,166	-		ABIE53_000076	0.76	+3.6
89,278	+				+3.5
89,278	+				+3.8
89,278	+				+3.4
89,278	+				+3.0
89,278	+				+3.8
89,279	-				+2.8
89,279	-				+3.2
89,320	+				-0.4
89,320	+				-0.3
89,320	+				-1.3
89,320	+				+0.2
89,320	+				-0.6
89,320	+				+4.4
89,320	+				-0.4
89,320	+				+1.2
89,320	+				-0.3
89,320	+				-0.2
89,320	+				+0.9
89,320	+				-0.2
89,320	+				-0.8
89,320	+				-1.5
89,320	+				-2.0
89,321	-				+3.0
89,321	-				+3.4
89,321	-				+4.7
89,321	-				+3.4
89,321	-				+3.4
89,321	-				+3.0
89,321	-				+3.2
89,321	-				+3.6
89,321	-				+2.1
89,321	-				+3.5
89,321	-				+2.5
89,321	-				+2.5
89,321	-				+4.8
89,321	-				+2.1
89,321	-				+3.0
89,321	-				+3.5
89,321	-				+2.2
89,321	-				+3.5
89,593	+		ABIE53_000077	0.16	+2.6
89,593	+		ABIE53_000077	0.16	+4.7
89,594	-		ABIE53_000077	0.16	+4.5
89,594	-		ABIE53_000077	0.16	+3.0
89,594	-		ABIE53_000077	0.16	+3.3