Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS04020 and ABIE51_RS04025 are separated by 111 nucleotides ABIE51_RS04025 and ABIE51_RS04030 are separated by 130 nucleotides
ABIE51_RS04020: ABIE51_RS04020 - sensor domain-containing diguanylate cyclase, at 872,689 to 873,792
_RS04020
ABIE51_RS04025: ABIE51_RS04025 - VOC family protein, at 873,904 to 874,290
_RS04025
ABIE51_RS04030: ABIE51_RS04030 - dihydrolipoamide acetyltransferase family protein, at 874,421 to 875,842
_RS04030
Position (kb) 873
874
875 Strain fitness (log2 ratio) -2
-1
0
1 at 872.980 kb on + strand, within ABIE51_RS04020 at 872.980 kb on + strand, within ABIE51_RS04020 at 872.980 kb on + strand, within ABIE51_RS04020 at 872.981 kb on - strand, within ABIE51_RS04020 at 872.981 kb on - strand, within ABIE51_RS04020 at 872.981 kb on - strand, within ABIE51_RS04020 at 872.981 kb on - strand, within ABIE51_RS04020 at 872.981 kb on - strand, within ABIE51_RS04020 at 873.040 kb on + strand, within ABIE51_RS04020 at 873.040 kb on + strand, within ABIE51_RS04020 at 873.040 kb on + strand, within ABIE51_RS04020 at 873.040 kb on + strand, within ABIE51_RS04020 at 873.327 kb on - strand, within ABIE51_RS04020 at 873.327 kb on - strand, within ABIE51_RS04020 at 873.727 kb on + strand at 873.728 kb on - strand at 873.771 kb on + strand at 873.771 kb on + strand at 873.772 kb on - strand at 873.772 kb on - strand at 874.121 kb on + strand, within ABIE51_RS04025 at 874.121 kb on + strand, within ABIE51_RS04025 at 874.122 kb on - strand, within ABIE51_RS04025 at 874.154 kb on + strand, within ABIE51_RS04025 at 874.327 kb on - strand at 874.327 kb on - strand at 874.422 kb on + strand at 874.423 kb on - strand at 874.574 kb on - strand, within ABIE51_RS04030 at 874.666 kb on - strand, within ABIE51_RS04030
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 872,980 + ABIE51_RS04020 0.26 +0.2 872,980 + ABIE51_RS04020 0.26 -0.1 872,980 + ABIE51_RS04020 0.26 +0.0 872,981 - ABIE51_RS04020 0.26 +0.6 872,981 - ABIE51_RS04020 0.26 -1.7 872,981 - ABIE51_RS04020 0.26 +0.8 872,981 - ABIE51_RS04020 0.26 +0.5 872,981 - ABIE51_RS04020 0.26 +0.2 873,040 + ABIE51_RS04020 0.32 +1.6 873,040 + ABIE51_RS04020 0.32 -0.4 873,040 + ABIE51_RS04020 0.32 -0.1 873,040 + ABIE51_RS04020 0.32 -0.2 873,327 - ABIE51_RS04020 0.58 +0.2 873,327 - ABIE51_RS04020 0.58 -0.1 873,727 + +1.5 873,728 - -0.4 873,771 + -0.1 873,771 + -0.7 873,772 - +0.4 873,772 - +0.7 874,121 + ABIE51_RS04025 0.56 -2.4 874,121 + ABIE51_RS04025 0.56 +0.0 874,122 - ABIE51_RS04025 0.56 +0.5 874,154 + ABIE51_RS04025 0.65 -0.1 874,327 - -0.5 874,327 - +0.4 874,422 + +0.2 874,423 - -0.1 874,574 - ABIE51_RS04030 0.11 +0.3 874,666 - ABIE51_RS04030 0.17 -0.5
Or see this region's nucleotide sequence