Strain Fitness in Pantoea sp. MT58 around IAI47_16780

Experiment: copper (II) chloride 5 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 5 uM, aerobic
3,550,277	-		IAI47_16770	0.83	-1.4
3,550,346	+		IAI47_16770	0.90	+1.7
3,550,346	+		IAI47_16770	0.90	+1.0
3,550,347	-		IAI47_16770	0.90	-2.2
3,550,347	-		IAI47_16770	0.90	-1.0
3,550,347	-		IAI47_16770	0.90	-0.1
3,550,352	+				+0.0
3,550,352	+				+0.1
3,550,352	+				+0.3
3,550,352	+				-0.9
3,550,352	+				-0.5
3,550,352	+				-1.2
3,550,353	-				+0.5
3,550,353	-				+0.3
3,550,353	-				+0.4
3,550,353	-				+1.2
3,550,353	-				-1.7
3,550,353	-				+1.4
3,550,353	-				+0.5
3,550,353	-				+0.4
3,550,353	-				-1.0
3,550,360	+				+0.4
3,550,360	+				-2.1
3,550,361	-				-0.1
3,550,361	-				+0.9
3,550,419	+				-0.7
3,550,420	-				+0.3
3,550,454	+				-1.1
3,550,467	+				+0.6
3,550,467	+				+0.2
3,550,467	+				-0.8
3,550,467	+				+1.3
3,550,486	-				+0.1
3,550,552	+		IAI47_16775	0.11	-0.3
3,550,552	+		IAI47_16775	0.11	+0.6
3,550,561	+		IAI47_16775	0.12	+0.6
3,550,561	+		IAI47_16775	0.12	-1.8
3,550,579	+		IAI47_16775	0.14	+0.3
3,550,580	-		IAI47_16775	0.15	+0.4
3,550,580	-		IAI47_16775	0.15	-1.4
3,550,604	+		IAI47_16775	0.18	-0.2
3,550,605	-		IAI47_16775	0.18	+0.7
3,550,605	-		IAI47_16775	0.18	+0.6
3,550,605	-		IAI47_16775	0.18	+1.3
3,550,616	+		IAI47_16775	0.19	-0.1
3,550,616	+		IAI47_16775	0.19	+0.3
3,550,616	+		IAI47_16775	0.19	-0.6
3,550,616	+		IAI47_16775	0.19	+0.8
3,550,616	+		IAI47_16775	0.19	-1.2
3,550,616	+		IAI47_16775	0.19	-0.4
3,550,616	+		IAI47_16775	0.19	+0.6
3,550,616	+		IAI47_16775	0.19	+0.2
3,550,616	+		IAI47_16775	0.19	-0.3
3,550,616	+		IAI47_16775	0.19	+0.0
3,550,616	+		IAI47_16775	0.19	-0.0
3,550,617	-		IAI47_16775	0.19	-0.3
3,550,617	-		IAI47_16775	0.19	+0.2
3,550,617	-		IAI47_16775	0.19	-0.6
3,550,617	-		IAI47_16775	0.19	+0.7
3,550,617	-		IAI47_16775	0.19	+0.5
3,550,617	-		IAI47_16775	0.19	+1.0
3,550,617	-		IAI47_16775	0.19	+0.2
3,550,617	-		IAI47_16775	0.19	-0.7
3,550,617	-		IAI47_16775	0.19	+0.4
3,550,617	-		IAI47_16775	0.19	+1.7
3,550,711	+		IAI47_16775	0.32	-0.4
3,550,711	+		IAI47_16775	0.32	-0.3
3,550,711	+		IAI47_16775	0.32	-0.6
3,550,711	+		IAI47_16775	0.32	+0.8
3,550,712	-		IAI47_16775	0.32	-1.4
3,550,712	-		IAI47_16775	0.32	+1.3
3,550,712	-		IAI47_16775	0.32	-0.3
3,550,712	-		IAI47_16775	0.32	-0.2
3,550,732	+		IAI47_16775	0.35	-0.1
3,550,733	-		IAI47_16775	0.35	-1.0
3,550,741	-		IAI47_16775	0.36	+1.1
3,550,784	+		IAI47_16775	0.42	+1.2
3,550,784	+		IAI47_16775	0.42	-0.2
3,550,784	+		IAI47_16775	0.42	+2.0
3,550,784	+		IAI47_16775	0.42	+1.1
3,550,784	+		IAI47_16775	0.42	+0.2
3,550,784	+		IAI47_16775	0.42	-2.2
3,550,784	+		IAI47_16775	0.42	+0.6
3,550,784	+		IAI47_16775	0.42	+0.8
3,550,785	-		IAI47_16775	0.42	+0.1
3,550,785	-		IAI47_16775	0.42	-1.4
3,550,785	-		IAI47_16775	0.42	+0.2
3,550,785	-		IAI47_16775	0.42	-0.4
3,550,824	-		IAI47_16775	0.47	-1.3
3,550,841	-		IAI47_16775	0.49	+2.9
3,550,941	-		IAI47_16775	0.62	+0.7
3,550,968	+		IAI47_16775	0.66	+1.1
3,550,968	+		IAI47_16775	0.66	+0.2
3,550,968	+		IAI47_16775	0.66	-1.1
3,550,969	-		IAI47_16775	0.66	-0.6
3,550,972	+		IAI47_16775	0.66	-0.2
3,550,972	+		IAI47_16775	0.66	+1.2
3,550,972	+		IAI47_16775	0.66	+1.5
3,550,973	-		IAI47_16775	0.66	+0.5
3,550,973	-		IAI47_16775	0.66	+0.5
3,550,973	-		IAI47_16775	0.66	+1.0
3,550,973	-		IAI47_16775	0.66	+0.9
3,550,973	-		IAI47_16775	0.66	+0.2
3,550,973	-		IAI47_16775	0.66	+0.6
3,550,973	-		IAI47_16775	0.66	-0.9
3,550,973	-		IAI47_16775	0.66	-1.2
3,550,978	+		IAI47_16775	0.67	-0.5
3,551,001	+		IAI47_16775	0.70	+0.1
3,551,009	+		IAI47_16775	0.71	+0.5
3,551,009	+		IAI47_16775	0.71	+0.6
3,551,009	+		IAI47_16775	0.71	-0.6
3,551,009	+		IAI47_16775	0.71	-1.5
3,551,010	-		IAI47_16775	0.71	+0.3
3,551,010	-		IAI47_16775	0.71	+0.1
3,551,011	+		IAI47_16775	0.71	+0.9
3,551,011	+		IAI47_16775	0.71	-0.4
3,551,011	+		IAI47_16775	0.71	+1.1
3,551,011	+		IAI47_16775	0.71	-0.5
3,551,011	+		IAI47_16775	0.71	+0.6
3,551,011	+		IAI47_16775	0.71	-1.6
3,551,012	-		IAI47_16775	0.72	+0.9
3,551,012	-		IAI47_16775	0.72	-0.5
3,551,012	-		IAI47_16775	0.72	-0.1
3,551,012	-		IAI47_16775	0.72	+0.1
3,551,012	-		IAI47_16775	0.72	-0.4
3,551,012	-		IAI47_16775	0.72	-1.0
3,551,093	+		IAI47_16775	0.82	-1.8
3,551,094	-		IAI47_16775	0.82	+0.6
3,551,094	-		IAI47_16775	0.82	+0.8
3,551,128	+		IAI47_16775	0.87	+0.6
3,551,128	+		IAI47_16775	0.87	+0.8
3,551,128	+		IAI47_16775	0.87	+0.5
3,551,128	+		IAI47_16775	0.87	-0.1
3,551,128	+		IAI47_16775	0.87	+1.6
3,551,128	+		IAI47_16775	0.87	-0.2
3,551,128	+		IAI47_16775	0.87	+1.5
3,551,129	-		IAI47_16775	0.87	+1.6
3,551,129	-		IAI47_16775	0.87	+0.5
3,551,129	-		IAI47_16775	0.87	+1.8
3,551,129	-		IAI47_16775	0.87	+1.4
3,551,129	-		IAI47_16775	0.87	-0.8
3,551,241	-				+0.3
3,551,241	-				+0.6
3,551,274	+				+0.4
3,551,274	+				-0.6
3,551,274	+				+1.5
3,551,274	+				-0.4
3,551,274	+				+2.2
3,551,274	+				-0.4
3,551,275	-				+0.5
3,551,275	-				-0.2
3,551,275	-				-0.3
3,551,275	-				-0.3
3,551,275	-				+0.6
3,551,420	+		IAI47_16780	0.18	-0.1
3,551,420	+		IAI47_16780	0.18	-0.3
3,551,421	-		IAI47_16780	0.18	-0.5
3,551,428	-		IAI47_16780	0.18	-1.2
3,551,428	-		IAI47_16780	0.18	+1.2
3,551,442	+		IAI47_16780	0.20	-1.6
3,551,442	+		IAI47_16780	0.20	+0.3
3,551,473	+		IAI47_16780	0.22	-0.2
3,551,473	+		IAI47_16780	0.22	+0.4
3,551,473	+		IAI47_16780	0.22	+0.5
3,551,473	+		IAI47_16780	0.22	+0.9
3,551,507	+		IAI47_16780	0.25	-0.1
3,551,507	+		IAI47_16780	0.25	+0.4
3,551,507	+		IAI47_16780	0.25	-0.2
3,551,507	+		IAI47_16780	0.25	+0.6
3,551,507	+		IAI47_16780	0.25	+0.5
3,551,507	+		IAI47_16780	0.25	+0.2
3,551,507	+		IAI47_16780	0.25	+0.5
3,551,507	+		IAI47_16780	0.25	-1.1
3,551,507	+		IAI47_16780	0.25	-0.2
3,551,507	+		IAI47_16780	0.25	+0.9
3,551,507	+		IAI47_16780	0.25	+1.6
3,551,508	-		IAI47_16780	0.26	-0.4
3,551,508	-		IAI47_16780	0.26	+0.5
3,551,508	-		IAI47_16780	0.26	+0.2
3,551,508	-		IAI47_16780	0.26	-0.8
3,551,508	-		IAI47_16780	0.26	-0.9
3,551,508	-		IAI47_16780	0.26	+0.4
3,551,508	-		IAI47_16780	0.26	+0.8
3,551,508	-		IAI47_16780	0.26	-1.6
3,551,509	+		IAI47_16780	0.26	-0.2
3,551,509	+		IAI47_16780	0.26	+0.4
3,551,509	+		IAI47_16780	0.26	+1.6
3,551,509	+		IAI47_16780	0.26	+0.7
3,551,510	-		IAI47_16780	0.26	+0.3
3,551,510	-		IAI47_16780	0.26	+0.0
3,551,510	-		IAI47_16780	0.26	+0.2
3,551,665	-		IAI47_16780	0.40	-0.6
3,551,665	-		IAI47_16780	0.40	-0.4
3,551,709	+		IAI47_16780	0.44	+0.3
3,551,710	-		IAI47_16780	0.44	-0.2
3,551,719	+		IAI47_16780	0.45	-0.4
3,551,720	-		IAI47_16780	0.45	+0.8
3,551,805	+		IAI47_16780	0.52	+0.3
3,551,805	+		IAI47_16780	0.52	+0.1
3,551,806	-		IAI47_16780	0.52	-0.6
3,551,808	+		IAI47_16780	0.53	+0.3
3,551,808	+		IAI47_16780	0.53	+0.2
3,551,808	+		IAI47_16780	0.53	-0.1
3,551,809	-		IAI47_16780	0.53	+0.9
3,551,809	-		IAI47_16780	0.53	-0.3
3,551,818	+		IAI47_16780	0.54	-0.2
3,551,818	+		IAI47_16780	0.54	+0.1
3,551,818	+		IAI47_16780	0.54	+0.8
3,551,818	+		IAI47_16780	0.54	+0.2
3,551,931	+		IAI47_16780	0.64	+0.1
3,551,931	+		IAI47_16780	0.64	-0.4
3,551,932	-		IAI47_16780	0.64	+0.3
3,551,932	-		IAI47_16780	0.64	-0.3
3,551,950	-		IAI47_16780	0.65	+0.7
3,551,950	-		IAI47_16780	0.65	+0.2
3,552,023	+		IAI47_16780	0.72	+0.8
3,552,023	+		IAI47_16780	0.72	+0.4
3,552,023	+		IAI47_16780	0.72	-1.7
3,552,024	-		IAI47_16780	0.72	-0.1
3,552,024	-		IAI47_16780	0.72	-0.3
3,552,109	+		IAI47_16780	0.80	+0.2
3,552,109	+		IAI47_16780	0.80	+0.7
3,552,110	-		IAI47_16780	0.80	+0.3
3,552,110	-		IAI47_16780	0.80	+1.3
3,552,128	+		IAI47_16780	0.81	-0.1
3,552,128	+		IAI47_16780	0.81	-1.3
3,552,128	+		IAI47_16780	0.81	-0.4
3,552,128	+		IAI47_16780	0.81	-0.2
3,552,128	+		IAI47_16780	0.81	+0.3
3,552,129	-		IAI47_16780	0.82	-2.9
3,552,129	-		IAI47_16780	0.82	+0.0
3,552,129	-		IAI47_16780	0.82	+0.7
3,552,129	-		IAI47_16780	0.82	+0.5
3,552,129	-		IAI47_16780	0.82	+0.3
3,552,129	-		IAI47_16780	0.82	-0.9
3,552,129	-		IAI47_16780	0.82	-1.6
3,552,129	-		IAI47_16780	0.82	+0.7
3,552,163	+		IAI47_16780	0.85	+0.6
3,552,164	-		IAI47_16780	0.85	-1.4
3,552,164	-		IAI47_16780	0.85	+1.2
3,552,164	-		IAI47_16780	0.85	-0.3
3,552,182	+		IAI47_16780	0.86	-1.0
3,552,183	-		IAI47_16780	0.86	+0.2
3,552,183	-		IAI47_16780	0.86	+0.8
3,552,213	+		IAI47_16780	0.89	+1.2
3,552,213	+		IAI47_16780	0.89	-0.6
3,552,213	+		IAI47_16780	0.89	+5.0
3,552,213	+		IAI47_16780	0.89	+0.2
3,552,214	-		IAI47_16780	0.89	-1.2
3,552,216	+		IAI47_16780	0.89	+2.2
3,552,216	+		IAI47_16780	0.89	+0.6
3,552,216	+		IAI47_16780	0.89	-1.9
3,552,216	+		IAI47_16780	0.89	-0.8
3,552,217	-		IAI47_16780	0.89	+0.7
3,552,217	-		IAI47_16780	0.89	+0.4
3,552,217	-		IAI47_16780	0.89	-0.5
3,552,262	+				+1.6
3,552,262	+				+0.7
3,552,262	+				-0.4
3,552,262	+				+2.0
3,552,263	-				+0.7
3,552,263	-				+1.1
3,552,263	-				+0.4
3,552,301	+				+0.3
3,552,301	+				+1.1
3,552,301	+				+0.4
3,552,301	+				+0.1
3,552,302	-				-0.2
3,552,302	-				-0.7
3,552,302	-				+0.0
3,552,302	-				-0.4
3,552,314	+				+0.8
3,552,314	+				+0.6
3,552,314	+				+0.1
3,552,314	+				-0.0
3,552,339	+				-0.3
3,552,339	+				-0.9
3,552,352	+				+0.5
3,552,352	+				+0.1
3,552,352	+				-0.0
3,552,352	+				+0.2
3,552,440	-				-0.6
3,552,450	-				+1.3
3,552,450	-				-0.6
3,552,459	-				-0.2
3,552,459	-				-1.7
3,552,459	-				-0.4
3,552,459	-				-1.1
3,552,459	-				-1.3
3,552,459	-				+1.3
3,552,459	-				-0.1
3,552,459	-				+0.3
3,552,465	-				+0.2
3,552,465	-				+0.6
3,552,465	-				-1.6
3,552,465	-				-0.7
3,552,465	-				-0.9
3,552,465	-				+1.1