Strain Fitness in Pantoea sp. MT58 around IAI47_16260

Experiment: copper (II) chloride 5 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 5 uM, aerobic
3,441,389	+				+0.6
3,441,389	+				+0.1
3,441,389	+				+0.4
3,441,390	-				-1.1
3,441,390	-				+0.3
3,441,390	-				-0.2
3,441,390	-				+0.4
3,441,457	+				+0.6
3,441,458	-				-1.4
3,441,473	+				-1.1
3,441,481	+				+0.0
3,441,481	+				+0.3
3,441,481	+				+1.6
3,441,481	+				+1.3
3,441,481	+				-1.0
3,441,481	+				+0.9
3,441,481	+				+0.4
3,441,481	+				-0.4
3,441,481	+				+0.9
3,441,482	-				-1.5
3,441,482	-				+1.0
3,441,482	-				+0.8
3,441,482	-				+1.0
3,441,482	-				-1.8
3,441,482	-				+0.4
3,441,482	-				-0.4
3,441,482	-				+0.5
3,441,482	-				+0.4
3,441,482	-				-0.3
3,441,482	-				-0.1
3,441,482	-				-0.1
3,441,485	+				-0.1
3,441,485	+				+0.1
3,441,485	+				-0.1
3,441,485	+				+1.9
3,441,485	+				+1.0
3,441,486	-				+0.9
3,441,486	-				+0.0
3,441,486	-				-0.4
3,441,486	-				-0.4
3,441,486	-				+1.1
3,441,486	-				+1.1
3,441,486	-				+0.2
3,441,486	-				-0.2
3,441,486	-				+1.7
3,441,486	-				-0.7
3,441,574	+		IAI47_16250	0.18	-1.8
3,441,574	+		IAI47_16250	0.18	+0.5
3,441,574	+		IAI47_16250	0.18	+1.0
3,441,575	-		IAI47_16250	0.18	+0.4
3,441,575	-		IAI47_16250	0.18	-0.2
3,441,877	+		IAI47_16250	0.76	+0.3
3,441,877	+		IAI47_16250	0.76	-0.8
3,441,877	+		IAI47_16250	0.76	-0.5
3,441,878	-		IAI47_16250	0.76	+1.3
3,441,941	+		IAI47_16250	0.88	-3.2
3,441,941	+		IAI47_16250	0.88	-0.8
3,441,942	-		IAI47_16250	0.89	-0.2
3,441,942	-		IAI47_16250	0.89	+0.7
3,441,989	+				-0.1
3,441,990	-				+0.7
3,441,998	+				+0.7
3,441,998	+				-0.1
3,441,999	-				+0.3
3,442,064	-		IAI47_16255	0.20	+1.7
3,442,066	+		IAI47_16255	0.20	+0.2
3,442,066	+		IAI47_16255	0.20	-0.7
3,442,066	+		IAI47_16255	0.20	-0.4
3,442,067	-		IAI47_16255	0.21	+1.3
3,442,067	-		IAI47_16255	0.21	-0.8
3,442,067	-		IAI47_16255	0.21	-0.8
3,442,067	-		IAI47_16255	0.21	+2.6
3,442,142	+		IAI47_16255	0.44	+0.1
3,442,142	+		IAI47_16255	0.44	+1.1
3,442,142	+		IAI47_16255	0.44	+0.2
3,442,142	+		IAI47_16255	0.44	+0.7
3,442,143	-		IAI47_16255	0.44	+0.5
3,442,143	-		IAI47_16255	0.44	+0.0
3,442,143	-		IAI47_16255	0.44	+0.9
3,442,143	-		IAI47_16255	0.44	-0.5
3,442,143	-		IAI47_16255	0.44	-0.2
3,442,154	-		IAI47_16255	0.48	+0.2
3,442,154	-		IAI47_16255	0.48	-1.1
3,442,273	+		IAI47_16255	0.85	-0.5
3,442,273	+		IAI47_16255	0.85	-0.9
3,442,273	+		IAI47_16255	0.85	+0.1
3,442,273	+		IAI47_16255	0.85	-0.6
3,442,274	-		IAI47_16255	0.85	-0.9
3,442,274	-		IAI47_16255	0.85	-0.5
3,442,297	+				-0.6
3,442,297	+				+0.5
3,442,359	+				+0.4
3,442,360	-				-1.1
3,442,360	-				+0.1
3,442,360	-				+0.9
3,442,368	+				-2.0
3,442,368	+				+0.1
3,442,368	+				-1.2
3,442,368	+				+1.4
3,442,368	+				+0.2
3,442,368	+				-0.5
3,442,368	+				-1.4
3,442,369	-				-1.0
3,442,369	-				-0.8
3,442,369	-				-0.4
3,442,369	-				-0.3
3,442,371	+				-1.7
3,442,372	-				+0.4
3,442,372	-				+1.6
3,442,425	+				+1.1
3,442,425	+				+0.2
3,442,425	+				+0.4
3,442,426	-				-0.4
3,442,426	-				+0.3
3,442,431	+				-0.1
3,442,431	+				-0.1
3,442,431	+				-0.0
3,442,431	+				-0.8
3,442,431	+				+0.8
3,442,432	-				-2.0
3,442,432	-				-0.1
3,442,432	-				+2.0
3,442,432	-				-0.3
3,442,432	-				-2.3
3,442,432	-				-2.4
3,442,432	-				+0.3
3,442,434	+				-1.0
3,442,434	+				+0.9
3,442,434	+				-0.6
3,442,434	+				+0.3
3,442,434	+				-1.5
3,442,434	+				+0.9
3,442,443	+				-0.9
3,442,443	+				+1.5
3,442,464	+				-1.4
3,442,498	+				-1.6
3,442,499	-				-1.1
3,442,499	-				-0.8
3,442,499	-				-0.4
3,442,505	+				+1.0
3,442,568	-		IAI47_16260	0.10	-1.0
3,442,569	+		IAI47_16260	0.11	+0.8
3,442,569	+		IAI47_16260	0.11	+0.8
3,442,569	+		IAI47_16260	0.11	+0.0
3,442,570	-		IAI47_16260	0.11	+0.2
3,442,570	-		IAI47_16260	0.11	-0.8
3,442,611	+		IAI47_16260	0.13	-0.9
3,442,611	+		IAI47_16260	0.13	+1.1
3,442,611	+		IAI47_16260	0.13	+0.8
3,442,612	-		IAI47_16260	0.13	-0.4
3,442,617	+		IAI47_16260	0.13	+0.7
3,442,617	+		IAI47_16260	0.13	-2.5
3,442,617	+		IAI47_16260	0.13	+1.4
3,442,617	+		IAI47_16260	0.13	+0.2
3,442,617	+		IAI47_16260	0.13	+1.0
3,442,617	+		IAI47_16260	0.13	-1.4
3,442,617	+		IAI47_16260	0.13	-0.0
3,442,617	+		IAI47_16260	0.13	-1.0
3,442,617	+		IAI47_16260	0.13	+0.2
3,442,617	+		IAI47_16260	0.13	-0.6
3,442,618	-		IAI47_16260	0.13	+0.6
3,442,618	-		IAI47_16260	0.13	-1.5
3,442,618	-		IAI47_16260	0.13	-1.0
3,442,618	-		IAI47_16260	0.13	-1.1
3,442,618	-		IAI47_16260	0.13	+0.7
3,442,626	+		IAI47_16260	0.13	-0.3
3,442,626	+		IAI47_16260	0.13	-0.1
3,442,626	+		IAI47_16260	0.13	+0.8
3,442,627	-		IAI47_16260	0.14	-1.6
3,442,634	-		IAI47_16260	0.14	+0.2
3,442,683	+		IAI47_16260	0.16	-0.0
3,442,684	-		IAI47_16260	0.17	-2.1
3,442,684	-		IAI47_16260	0.17	-1.1
3,442,691	+		IAI47_16260	0.17	-0.1
3,442,691	+		IAI47_16260	0.17	-0.3
3,442,691	+		IAI47_16260	0.17	-0.6
3,442,691	+		IAI47_16260	0.17	-1.4
3,442,691	+		IAI47_16260	0.17	+1.2
3,442,691	+		IAI47_16260	0.17	+0.1
3,442,691	+		IAI47_16260	0.17	+0.1
3,442,691	+		IAI47_16260	0.17	+0.1
3,442,691	+		IAI47_16260	0.17	+0.5
3,442,691	+		IAI47_16260	0.17	+0.2
3,442,691	+		IAI47_16260	0.17	+0.6
3,442,692	-		IAI47_16260	0.17	+0.4
3,442,692	-		IAI47_16260	0.17	-0.8
3,442,692	-		IAI47_16260	0.17	-0.2
3,442,692	-		IAI47_16260	0.17	+0.6
3,442,692	-		IAI47_16260	0.17	+0.6
3,442,692	-		IAI47_16260	0.17	-0.1
3,442,692	-		IAI47_16260	0.17	-0.7
3,442,692	-		IAI47_16260	0.17	-0.3
3,442,693	+		IAI47_16260	0.17	+1.1
3,442,693	+		IAI47_16260	0.17	+0.9
3,442,694	-		IAI47_16260	0.17	-0.4
3,442,694	-		IAI47_16260	0.17	-0.9
3,442,694	-		IAI47_16260	0.17	-0.4
3,442,694	-		IAI47_16260	0.17	-0.1
3,442,694	-		IAI47_16260	0.17	-0.7
3,442,698	+		IAI47_16260	0.17	-0.3
3,442,698	+		IAI47_16260	0.17	+0.7
3,442,698	+		IAI47_16260	0.17	+0.4
3,442,698	+		IAI47_16260	0.17	-1.6
3,442,698	+		IAI47_16260	0.17	-0.2
3,442,698	+		IAI47_16260	0.17	+0.9
3,442,698	+		IAI47_16260	0.17	+1.3
3,442,698	+		IAI47_16260	0.17	+0.2
3,442,699	-		IAI47_16260	0.17	+0.3
3,442,699	-		IAI47_16260	0.17	+0.5
3,442,699	-		IAI47_16260	0.17	+0.7
3,442,699	-		IAI47_16260	0.17	-0.9
3,442,699	-		IAI47_16260	0.17	-1.0
3,442,699	-		IAI47_16260	0.17	-1.4
3,442,711	+		IAI47_16260	0.18	+0.0
3,442,711	+		IAI47_16260	0.18	-0.1
3,442,712	-		IAI47_16260	0.18	-1.8
3,442,712	-		IAI47_16260	0.18	-1.8
3,442,712	-		IAI47_16260	0.18	+1.2
3,442,712	-		IAI47_16260	0.18	+0.4
3,442,732	+		IAI47_16260	0.19	+1.2
3,442,732	+		IAI47_16260	0.19	-1.0
3,442,732	+		IAI47_16260	0.19	-0.4
3,442,732	+		IAI47_16260	0.19	+0.4
3,442,733	-		IAI47_16260	0.19	-1.1
3,442,733	-		IAI47_16260	0.19	-0.2
3,442,733	-		IAI47_16260	0.19	-0.5
3,442,733	-		IAI47_16260	0.19	+0.8
3,442,815	+		IAI47_16260	0.23	+0.8
3,442,815	+		IAI47_16260	0.23	-0.3
3,442,815	+		IAI47_16260	0.23	-0.8
3,442,815	+		IAI47_16260	0.23	-0.0
3,442,816	-		IAI47_16260	0.23	-0.8
3,442,816	-		IAI47_16260	0.23	-0.3
3,442,843	+		IAI47_16260	0.25	+1.2
3,442,843	+		IAI47_16260	0.25	-0.6
3,442,854	+		IAI47_16260	0.25	-0.2
3,442,854	+		IAI47_16260	0.25	+0.3
3,442,854	+		IAI47_16260	0.25	-0.6
3,442,855	-		IAI47_16260	0.25	-0.9
3,442,855	-		IAI47_16260	0.25	-1.5
3,442,916	-		IAI47_16260	0.29	+0.5
3,442,916	-		IAI47_16260	0.29	-0.5
3,442,984	+		IAI47_16260	0.32	-1.0
3,442,985	-		IAI47_16260	0.32	-0.3
3,442,985	-		IAI47_16260	0.32	+0.8
3,443,047	-		IAI47_16260	0.35	-0.2
3,443,047	-		IAI47_16260	0.35	-0.1
3,443,130	+		IAI47_16260	0.40	+0.2
3,443,130	+		IAI47_16260	0.40	+0.0
3,443,130	+		IAI47_16260	0.40	+0.6
3,443,131	-		IAI47_16260	0.40	+0.4
3,443,135	+		IAI47_16260	0.40	+1.3
3,443,135	+		IAI47_16260	0.40	-0.4
3,443,136	-		IAI47_16260	0.40	-0.0
3,443,136	-		IAI47_16260	0.40	-0.2
3,443,136	-		IAI47_16260	0.40	-0.2
3,443,136	-		IAI47_16260	0.40	+0.2
3,443,136	-		IAI47_16260	0.40	-0.8
3,443,166	+		IAI47_16260	0.42	+0.6
3,443,219	-		IAI47_16260	0.44	+2.8
3,443,219	-		IAI47_16260	0.44	+0.3
3,443,253	+		IAI47_16260	0.46	-0.5
3,443,254	-		IAI47_16260	0.46	-0.3
3,443,254	-		IAI47_16260	0.46	-0.9
3,443,368	+		IAI47_16260	0.52	-0.7
3,443,387	+		IAI47_16260	0.53	-1.1
3,443,387	+		IAI47_16260	0.53	+1.2
3,443,387	+		IAI47_16260	0.53	+0.0
3,443,388	-		IAI47_16260	0.53	+0.6
3,443,388	-		IAI47_16260	0.53	-1.0
3,443,555	-		IAI47_16260	0.62	+1.0
3,443,555	-		IAI47_16260	0.62	-0.2
3,443,562	+		IAI47_16260	0.62	-2.0
3,443,562	+		IAI47_16260	0.62	-0.3
3,443,562	+		IAI47_16260	0.62	+1.2
3,443,562	+		IAI47_16260	0.62	+0.1
3,443,563	-		IAI47_16260	0.62	-0.8
3,443,563	-		IAI47_16260	0.62	-0.2
3,443,624	+		IAI47_16260	0.65	+0.2
3,443,649	-		IAI47_16260	0.67	+0.0
3,443,697	+		IAI47_16260	0.69	-0.1
3,443,697	+		IAI47_16260	0.69	-0.3
3,443,697	+		IAI47_16260	0.69	+0.2
3,443,697	+		IAI47_16260	0.69	-1.2
3,443,698	-		IAI47_16260	0.69	+0.8
3,443,698	-		IAI47_16260	0.69	-0.1
3,443,698	-		IAI47_16260	0.69	-0.6
3,443,740	+		IAI47_16260	0.72	-0.5
3,443,740	+		IAI47_16260	0.72	+1.1
3,443,741	-		IAI47_16260	0.72	-0.7
3,443,752	+		IAI47_16260	0.72	-1.4
3,443,752	+		IAI47_16260	0.72	+0.7
3,443,752	+		IAI47_16260	0.72	-0.1
3,443,752	+		IAI47_16260	0.72	-0.7
3,443,753	-		IAI47_16260	0.72	+0.1
3,443,753	-		IAI47_16260	0.72	-0.6
3,443,755	+		IAI47_16260	0.72	+0.5
3,443,756	-		IAI47_16260	0.72	+1.0
3,443,756	-		IAI47_16260	0.72	-0.2
3,443,756	-		IAI47_16260	0.72	-1.1
3,443,756	-		IAI47_16260	0.72	-0.3
3,443,893	-		IAI47_16260	0.79	-0.4
3,443,893	-		IAI47_16260	0.79	+0.8
3,443,893	-		IAI47_16260	0.79	+0.5
3,443,895	+		IAI47_16260	0.80	+0.3
3,443,895	+		IAI47_16260	0.80	-1.1
3,443,895	+		IAI47_16260	0.80	-0.7
3,443,895	+		IAI47_16260	0.80	+0.0
3,443,902	+		IAI47_16260	0.80	+0.5
3,443,902	+		IAI47_16260	0.80	-0.4
3,443,903	-		IAI47_16260	0.80	-0.1
3,443,970	+		IAI47_16260	0.83	-0.5
3,443,986	+		IAI47_16260	0.84	+0.8
3,443,987	-		IAI47_16260	0.84	+0.0
3,444,028	-		IAI47_16260	0.87	-1.2
3,444,037	+		IAI47_16260	0.87	+0.4
3,444,102	+				+1.0
3,444,102	+				+0.1
3,444,103	-				-0.3
3,444,103	-				+0.2
3,444,103	-				-0.9
3,444,108	+				-0.2
3,444,108	+				-0.2
3,444,108	+				-1.1
3,444,109	-				-0.1
3,444,109	-				-2.2
3,444,118	-				-1.5
3,444,126	-				-0.3
3,444,126	-				+0.2
3,444,126	-				-0.9
3,444,130	+				-0.0
3,444,130	+				+0.6
3,444,260	+				-0.0
3,444,260	+				-0.5
3,444,260	+				+0.9
3,444,260	+				-0.9
3,444,261	-				+0.0
3,444,261	-				-0.8
3,444,271	+				-0.0
3,444,288	+				+0.3
3,444,288	+				-0.8
3,444,288	+				+0.1
3,444,288	+				-0.0
3,444,288	+				-0.4
3,444,288	+				-0.1
3,444,288	+				-0.8
3,444,289	-				+0.9
3,444,289	-				+0.1
3,444,289	-				-0.7
3,444,289	-				+0.1
3,444,289	-				+2.4
3,444,385	+				-0.4
3,444,385	+				+0.2
3,444,385	+				-1.0
3,444,385	+				-0.1
3,444,386	-				+0.2
3,444,395	+				-0.1
3,444,395	+				+0.5
3,444,395	+				+0.1
3,444,396	-				-0.9
3,444,396	-				-0.5
3,444,396	-				-0.5
3,444,396	-				-0.5
3,444,440	+				-0.6
3,444,457	-				+0.7
3,444,457	-				+0.7
3,444,459	+				-1.7
3,444,459	+				-1.5
3,444,460	-				-1.6
3,444,472	-				-0.3
3,444,492	+				-0.6
3,444,533	+				-0.6
3,444,533	+				-1.6
3,444,533	+				-1.8
3,444,534	-				-0.2
3,444,534	-				-1.2
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