Strain Fitness in Pantoea sp. MT58 around IAI47_10125

Experiment: copper (II) chloride 5 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 5 uM, aerobic
2,141,851	+				+0.7
2,141,851	+				-3.1
2,141,852	-				+0.9
2,141,884	+		IAI47_10115	0.22	+1.5
2,141,884	+		IAI47_10115	0.22	+0.6
2,141,885	-		IAI47_10115	0.23	-1.5
2,141,923	+		IAI47_10115	0.38	+1.0
2,141,924	-		IAI47_10115	0.39	+0.5
2,141,938	-		IAI47_10115	0.45	-1.4
2,141,938	-		IAI47_10115	0.45	+0.5
2,141,977	+		IAI47_10115	0.61	-1.9
2,141,977	+		IAI47_10115	0.61	+0.6
2,141,977	+		IAI47_10115	0.61	-0.2
2,141,977	+		IAI47_10115	0.61	+0.2
2,141,977	+		IAI47_10115	0.61	-0.4
2,141,985	+		IAI47_10115	0.64	-0.1
2,142,136	+				+0.5
2,142,136	+				-0.5
2,142,137	-				-0.4
2,142,137	-				-0.5
2,142,193	-				-1.1
2,142,193	-				-0.1
2,142,198	-				+0.0
2,142,211	+				-1.5
2,142,218	-				+0.2
2,142,225	-				+1.0
2,142,225	-				-0.2
2,142,232	-				+1.1
2,142,232	-				-0.8
2,142,232	-				-0.2
2,142,232	-				+0.7
2,142,233	+				-1.2
2,142,233	+				-1.6
2,142,233	+				+0.6
2,142,233	+				+1.1
2,142,233	+				-0.4
2,142,233	+				-0.7
2,142,234	-				-0.5
2,142,234	-				+0.9
2,142,234	-				+0.1
2,142,234	-				+0.7
2,142,234	-				+0.7
2,142,234	-				-0.1
2,142,234	-				-0.0
2,142,234	-				+0.4
2,142,234	-				-0.6
2,142,234	-				+0.1
2,142,234	-				-0.6
2,142,234	-				-1.2
2,142,239	+				+0.9
2,142,240	-				-0.2
2,142,240	-				-0.5
2,142,240	-				+0.0
2,142,250	+				-0.2
2,142,250	+				-0.9
2,142,296	+				-0.8
2,142,297	-				+0.6
2,142,316	+				-3.1
2,142,316	+				+0.6
2,142,319	+				+0.2
2,142,340	+				+0.6
2,142,341	-				+1.3
2,142,341	-				+0.6
2,142,341	-				+0.8
2,142,341	-				+1.0
2,142,341	-				+0.4
2,142,341	-				+0.6
2,142,440	+		IAI47_10120	0.20	-0.2
2,142,441	-		IAI47_10120	0.20	-0.7
2,142,444	+		IAI47_10120	0.21	-0.4
2,142,444	+		IAI47_10120	0.21	+1.4
2,142,444	+		IAI47_10120	0.21	+0.4
2,142,444	+		IAI47_10120	0.21	-1.0
2,142,445	-		IAI47_10120	0.21	+0.2
2,142,445	-		IAI47_10120	0.21	+0.5
2,142,445	-		IAI47_10120	0.21	+2.1
2,142,479	+		IAI47_10120	0.28	+1.5
2,142,479	+		IAI47_10120	0.28	+1.7
2,142,479	+		IAI47_10120	0.28	-0.0
2,142,479	+		IAI47_10120	0.28	-0.4
2,142,480	-		IAI47_10120	0.28	+0.7
2,142,480	-		IAI47_10120	0.28	+0.0
2,142,481	+		IAI47_10120	0.28	-0.4
2,142,482	-		IAI47_10120	0.28	+1.3
2,142,509	+		IAI47_10120	0.34	+0.3
2,142,510	-		IAI47_10120	0.34	+0.7
2,142,510	-		IAI47_10120	0.34	+0.3
2,142,510	-		IAI47_10120	0.34	-0.4
2,142,675	-		IAI47_10120	0.67	+0.4
2,142,675	-		IAI47_10120	0.67	-0.3
2,142,700	+		IAI47_10120	0.73	-0.6
2,142,721	+		IAI47_10120	0.77	+1.1
2,142,721	+		IAI47_10120	0.77	-0.5
2,142,833	+				-0.4
2,142,833	+				+0.5
2,142,834	-				+0.5
2,142,834	-				+1.6
2,142,851	+				-0.5
2,143,124	+		IAI47_10125	0.31	+0.0
2,143,124	+		IAI47_10125	0.31	-0.9
2,143,204	+		IAI47_10125	0.40	-0.2
2,143,204	+		IAI47_10125	0.40	-0.4
2,143,204	+		IAI47_10125	0.40	-0.8
2,143,204	+		IAI47_10125	0.40	+1.5
2,143,204	+		IAI47_10125	0.40	-0.2
2,143,205	-		IAI47_10125	0.40	-0.8
2,143,205	-		IAI47_10125	0.40	-0.1
2,143,205	-		IAI47_10125	0.40	-0.3
2,143,205	-		IAI47_10125	0.40	+0.2
2,143,309	+		IAI47_10125	0.51	+0.2
2,143,310	-		IAI47_10125	0.51	+0.2
2,143,326	+		IAI47_10125	0.53	+0.4
2,143,327	-		IAI47_10125	0.53	-0.7
2,143,327	-		IAI47_10125	0.53	-1.0
2,143,327	-		IAI47_10125	0.53	+0.6
2,143,327	-		IAI47_10125	0.53	-0.2
2,143,352	+		IAI47_10125	0.56	+0.9
2,143,352	+		IAI47_10125	0.56	-0.6
2,143,353	-		IAI47_10125	0.56	-1.9
2,143,401	+		IAI47_10125	0.62	+1.2
2,143,402	-		IAI47_10125	0.62	+0.8
2,143,415	-		IAI47_10125	0.63	-0.8
2,143,450	+		IAI47_10125	0.67	-0.3
2,143,451	-		IAI47_10125	0.67	-1.1
2,143,451	-		IAI47_10125	0.67	+0.2
2,143,506	+		IAI47_10125	0.73	-0.1
2,143,506	+		IAI47_10125	0.73	+1.2
2,143,506	+		IAI47_10125	0.73	+1.0
2,143,506	+		IAI47_10125	0.73	+0.3
2,143,507	-		IAI47_10125	0.73	-0.3
2,143,507	-		IAI47_10125	0.73	-0.4
2,143,507	-		IAI47_10125	0.73	+0.2
2,143,507	-		IAI47_10125	0.73	+1.0
2,143,507	-		IAI47_10125	0.73	+0.5
2,143,604	+		IAI47_10125	0.84	+0.1
2,143,604	+		IAI47_10125	0.84	-0.6
2,143,604	+		IAI47_10125	0.84	+0.3
2,143,605	-		IAI47_10125	0.84	-1.2
2,143,605	-		IAI47_10125	0.84	-2.9
2,143,605	-		IAI47_10125	0.84	-1.3
2,143,605	-		IAI47_10125	0.84	-0.6
2,143,713	+				+1.2
2,143,743	+				-0.9
2,143,743	+				+0.1
2,143,743	+				+0.7
2,143,744	-				+0.3
2,143,744	-				+0.6
2,143,744	-				+0.2
2,143,744	-				-1.6
2,143,744	-				+0.7
2,143,744	-				+0.1
2,143,744	-				-0.0
2,143,789	-				+0.5
2,143,796	+				-0.1
2,143,796	+				+0.6
2,143,796	+				-1.7
2,143,797	-				-1.4
2,143,797	-				+0.9
2,143,878	+				+0.1
2,143,893	+				+0.9
2,143,893	+				+0.3
2,143,894	-				-0.2
2,143,894	-				+0.4
2,143,934	+				-0.1
2,143,946	+				-3.0
2,143,946	+				+0.5
2,143,946	+				-0.9
2,143,946	+				+0.2
2,143,946	+				+0.4
2,143,947	-				+1.0
2,143,947	-				+1.1
2,143,947	-				+1.4
2,143,950	+				-1.6
2,143,951	-				-0.2
2,143,951	-				+1.6
2,143,951	-				+0.5
2,144,056	-				+0.9
2,144,063	-				+1.8
2,144,072	-				+0.5
2,144,099	+				-1.1
2,144,099	+				+0.4
2,144,099	+				-0.0
2,144,227	-				-1.1
2,144,227	-				-0.6
2,144,230	+				-0.8
2,144,231	-				+0.9
2,144,231	-				+0.9
2,144,231	-				-0.0
2,144,258	+				-0.4
2,144,348	-				-0.2
2,144,358	-				-0.9
2,144,358	-				-0.6
2,144,406	+				+0.2
2,144,415	+				-0.4
2,144,415	+				-1.0
2,144,415	+				-1.1
2,144,415	+				+0.6
2,144,416	-				-0.2
2,144,416	-				-0.9
2,144,416	-				+0.0
2,144,416	-				+0.2
2,144,416	-				+0.5
2,144,426	+				-1.9
2,144,532	+		IAI47_10130	0.18	+0.3
2,144,532	+		IAI47_10130	0.18	+0.2
2,144,533	-		IAI47_10130	0.18	-0.5
2,144,533	-		IAI47_10130	0.18	-1.0
2,144,533	-		IAI47_10130	0.18	-0.4
2,144,533	-		IAI47_10130	0.18	+0.0
2,144,533	-		IAI47_10130	0.18	-1.3
2,144,533	-		IAI47_10130	0.18	-0.8
2,144,600	+		IAI47_10130	0.23	+0.4
2,144,601	-		IAI47_10130	0.23	+1.3
2,144,601	-		IAI47_10130	0.23	+0.9
2,144,601	-		IAI47_10130	0.23	-0.1
2,144,622	+		IAI47_10130	0.25	-0.4
2,144,623	-		IAI47_10130	0.25	+1.0
2,144,675	-		IAI47_10130	0.29	+0.9
2,144,718	+		IAI47_10130	0.32	+1.0
2,144,718	+		IAI47_10130	0.32	-0.6
2,144,719	-		IAI47_10130	0.32	-0.0