Experiment: copper (II) chloride 5 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_03275 and IAI47_03280 are separated by 159 nucleotides IAI47_03280 and IAI47_03285 are separated by 129 nucleotides
IAI47_03275: IAI47_03275 - EAL domain-containing protein, at 679,559 to 681,643
_03275
IAI47_03280: IAI47_03280 - EAL domain-containing protein, at 681,803 to 683,947
_03280
IAI47_03285: IAI47_03285 - PLP-dependent aminotransferase family protein, at 684,077 to 685,480
_03285
Position (kb) 681
682
683
684 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 680.909 kb on + strand, within IAI47_03275 at 680.909 kb on + strand, within IAI47_03275 at 680.943 kb on + strand, within IAI47_03275 at 680.944 kb on - strand, within IAI47_03275 at 680.950 kb on - strand, within IAI47_03275 at 681.097 kb on + strand, within IAI47_03275 at 681.097 kb on + strand, within IAI47_03275 at 681.097 kb on + strand, within IAI47_03275 at 681.098 kb on - strand, within IAI47_03275 at 681.277 kb on + strand, within IAI47_03275 at 681.277 kb on + strand, within IAI47_03275 at 681.277 kb on + strand, within IAI47_03275 at 681.277 kb on + strand, within IAI47_03275 at 681.277 kb on + strand, within IAI47_03275 at 681.277 kb on + strand, within IAI47_03275 at 681.278 kb on - strand, within IAI47_03275 at 681.278 kb on - strand, within IAI47_03275 at 681.320 kb on - strand, within IAI47_03275 at 681.320 kb on - strand, within IAI47_03275 at 681.320 kb on - strand, within IAI47_03275 at 681.397 kb on + strand, within IAI47_03275 at 681.397 kb on + strand, within IAI47_03275 at 681.398 kb on - strand, within IAI47_03275 at 681.400 kb on + strand, within IAI47_03275 at 681.401 kb on - strand, within IAI47_03275 at 681.401 kb on - strand, within IAI47_03275 at 681.401 kb on - strand, within IAI47_03275 at 681.401 kb on - strand, within IAI47_03275 at 681.401 kb on - strand, within IAI47_03275 at 681.401 kb on - strand, within IAI47_03275 at 681.401 kb on - strand, within IAI47_03275 at 681.469 kb on + strand at 681.554 kb on + strand at 681.554 kb on + strand at 681.554 kb on + strand at 681.555 kb on - strand at 681.555 kb on - strand at 681.555 kb on - strand at 681.588 kb on + strand at 681.588 kb on + strand at 681.588 kb on + strand at 681.588 kb on + strand at 681.588 kb on + strand at 681.665 kb on + strand at 681.665 kb on + strand at 681.667 kb on + strand at 681.736 kb on - strand at 681.739 kb on + strand at 681.739 kb on + strand at 681.740 kb on - strand at 681.740 kb on - strand at 681.766 kb on - strand at 681.766 kb on - strand at 681.770 kb on - strand at 681.770 kb on - strand at 681.770 kb on - strand at 681.770 kb on - strand at 681.802 kb on + strand at 681.802 kb on + strand at 681.802 kb on + strand at 681.802 kb on + strand at 681.802 kb on + strand at 681.802 kb on + strand at 681.802 kb on + strand at 681.802 kb on + strand at 681.802 kb on + strand at 681.802 kb on + strand at 681.802 kb on + strand at 681.803 kb on - strand at 681.803 kb on - strand at 681.803 kb on - strand at 681.803 kb on - strand at 681.803 kb on - strand at 681.803 kb on - strand at 681.803 kb on - strand at 681.803 kb on - strand at 681.807 kb on + strand at 681.807 kb on + strand at 681.807 kb on + strand at 681.807 kb on + strand at 681.807 kb on + strand at 681.807 kb on + strand at 681.808 kb on - strand at 681.818 kb on + strand at 681.819 kb on - strand at 681.819 kb on - strand at 681.819 kb on - strand at 681.829 kb on + strand at 681.829 kb on + strand at 681.871 kb on + strand at 681.871 kb on + strand at 681.879 kb on + strand at 681.879 kb on + strand at 681.879 kb on + strand at 681.879 kb on + strand at 681.879 kb on + strand at 681.879 kb on + strand at 681.879 kb on + strand at 681.879 kb on + strand at 681.879 kb on + strand at 681.880 kb on - strand at 681.880 kb on - strand at 681.880 kb on - strand at 681.883 kb on + strand at 681.883 kb on + strand at 681.884 kb on - strand at 681.884 kb on - strand at 681.884 kb on - strand at 681.982 kb on + strand at 681.982 kb on + strand at 681.983 kb on - strand at 682.022 kb on + strand, within IAI47_03280 at 682.022 kb on + strand, within IAI47_03280 at 682.023 kb on - strand, within IAI47_03280 at 682.023 kb on - strand, within IAI47_03280 at 682.074 kb on + strand, within IAI47_03280 at 682.075 kb on - strand, within IAI47_03280 at 682.169 kb on + strand, within IAI47_03280 at 682.169 kb on + strand, within IAI47_03280 at 682.170 kb on - strand, within IAI47_03280 at 682.170 kb on - strand, within IAI47_03280 at 682.170 kb on - strand, within IAI47_03280 at 682.170 kb on - strand, within IAI47_03280 at 682.171 kb on + strand, within IAI47_03280 at 682.171 kb on + strand, within IAI47_03280 at 682.171 kb on + strand, within IAI47_03280 at 682.172 kb on - strand, within IAI47_03280 at 682.227 kb on + strand, within IAI47_03280 at 682.285 kb on + strand, within IAI47_03280 at 682.285 kb on + strand, within IAI47_03280 at 682.286 kb on - strand, within IAI47_03280 at 682.327 kb on + strand, within IAI47_03280 at 682.328 kb on - strand, within IAI47_03280 at 682.328 kb on - strand, within IAI47_03280 at 682.328 kb on - strand, within IAI47_03280 at 682.342 kb on - strand, within IAI47_03280 at 682.373 kb on + strand, within IAI47_03280 at 682.373 kb on + strand, within IAI47_03280 at 682.374 kb on - strand, within IAI47_03280 at 682.374 kb on - strand, within IAI47_03280 at 682.438 kb on + strand, within IAI47_03280 at 682.438 kb on + strand, within IAI47_03280 at 682.438 kb on + strand, within IAI47_03280 at 682.438 kb on + strand, within IAI47_03280 at 682.439 kb on - strand, within IAI47_03280 at 682.439 kb on - strand, within IAI47_03280 at 682.439 kb on - strand, within IAI47_03280 at 682.464 kb on + strand, within IAI47_03280 at 682.465 kb on - strand, within IAI47_03280 at 682.471 kb on + strand, within IAI47_03280 at 682.471 kb on + strand, within IAI47_03280 at 682.471 kb on + strand, within IAI47_03280 at 682.472 kb on - strand, within IAI47_03280 at 682.472 kb on - strand, within IAI47_03280 at 682.489 kb on + strand, within IAI47_03280 at 682.489 kb on + strand, within IAI47_03280 at 682.490 kb on - strand, within IAI47_03280 at 682.696 kb on + strand, within IAI47_03280 at 682.697 kb on - strand, within IAI47_03280 at 682.715 kb on - strand, within IAI47_03280 at 682.802 kb on + strand, within IAI47_03280 at 682.802 kb on + strand, within IAI47_03280 at 682.802 kb on + strand, within IAI47_03280 at 682.802 kb on + strand, within IAI47_03280 at 682.802 kb on + strand, within IAI47_03280 at 682.802 kb on + strand, within IAI47_03280 at 682.805 kb on + strand, within IAI47_03280 at 682.805 kb on + strand, within IAI47_03280 at 682.805 kb on + strand, within IAI47_03280 at 682.805 kb on + strand, within IAI47_03280 at 682.805 kb on + strand, within IAI47_03280 at 682.806 kb on - strand, within IAI47_03280 at 682.839 kb on + strand, within IAI47_03280 at 682.839 kb on + strand, within IAI47_03280 at 682.839 kb on + strand, within IAI47_03280 at 682.839 kb on + strand, within IAI47_03280 at 682.839 kb on + strand, within IAI47_03280 at 682.840 kb on - strand, within IAI47_03280 at 682.840 kb on - strand, within IAI47_03280 at 682.921 kb on + strand, within IAI47_03280 at 682.922 kb on - strand, within IAI47_03280 at 682.922 kb on - strand, within IAI47_03280 at 682.931 kb on + strand, within IAI47_03280 at 682.931 kb on + strand, within IAI47_03280 at 682.932 kb on - strand, within IAI47_03280 at 682.932 kb on - strand, within IAI47_03280 at 682.932 kb on - strand, within IAI47_03280 at 682.970 kb on + strand, within IAI47_03280 at 682.970 kb on + strand, within IAI47_03280 at 682.970 kb on + strand, within IAI47_03280 at 682.971 kb on - strand, within IAI47_03280 at 683.027 kb on + strand, within IAI47_03280 at 683.027 kb on + strand, within IAI47_03280 at 683.027 kb on + strand, within IAI47_03280 at 683.027 kb on + strand, within IAI47_03280 at 683.027 kb on + strand, within IAI47_03280 at 683.027 kb on + strand, within IAI47_03280 at 683.028 kb on - strand, within IAI47_03280 at 683.028 kb on - strand, within IAI47_03280 at 683.028 kb on - strand, within IAI47_03280 at 683.028 kb on - strand, within IAI47_03280 at 683.028 kb on - strand, within IAI47_03280 at 683.042 kb on - strand, within IAI47_03280 at 683.058 kb on - strand, within IAI47_03280 at 683.058 kb on - strand, within IAI47_03280 at 683.159 kb on + strand, within IAI47_03280 at 683.160 kb on - strand, within IAI47_03280 at 683.160 kb on - strand, within IAI47_03280 at 683.160 kb on - strand, within IAI47_03280 at 683.160 kb on - strand, within IAI47_03280 at 683.160 kb on - strand, within IAI47_03280 at 683.160 kb on - strand, within IAI47_03280 at 683.160 kb on - strand, within IAI47_03280 at 683.171 kb on + strand, within IAI47_03280 at 683.314 kb on + strand, within IAI47_03280 at 683.314 kb on + strand, within IAI47_03280 at 683.418 kb on + strand, within IAI47_03280 at 683.419 kb on - strand, within IAI47_03280 at 683.430 kb on + strand, within IAI47_03280 at 683.430 kb on + strand, within IAI47_03280 at 683.430 kb on + strand, within IAI47_03280 at 683.430 kb on + strand, within IAI47_03280 at 683.430 kb on + strand, within IAI47_03280 at 683.430 kb on + strand, within IAI47_03280 at 683.430 kb on + strand, within IAI47_03280 at 683.430 kb on + strand, within IAI47_03280 at 683.430 kb on + strand, within IAI47_03280 at 683.430 kb on + strand, within IAI47_03280 at 683.430 kb on + strand, within IAI47_03280 at 683.431 kb on - strand, within IAI47_03280 at 683.431 kb on - strand, within IAI47_03280 at 683.431 kb on - strand, within IAI47_03280 at 683.431 kb on - strand, within IAI47_03280 at 683.431 kb on - strand, within IAI47_03280 at 683.431 kb on - strand, within IAI47_03280 at 683.525 kb on - strand, within IAI47_03280 at 683.525 kb on - strand, within IAI47_03280 at 683.601 kb on - strand, within IAI47_03280 at 683.629 kb on + strand, within IAI47_03280 at 683.629 kb on + strand, within IAI47_03280 at 683.630 kb on - strand, within IAI47_03280 at 683.791 kb on + strand at 683.791 kb on + strand at 683.791 kb on + strand at 683.792 kb on - strand at 683.792 kb on - strand at 683.792 kb on - strand at 683.792 kb on - strand at 683.792 kb on - strand at 683.964 kb on + strand at 683.964 kb on + strand at 683.964 kb on + strand at 683.964 kb on + strand at 683.964 kb on + strand at 683.965 kb on - strand at 683.965 kb on - strand at 683.965 kb on - strand at 683.965 kb on - strand at 683.965 kb on - strand at 683.965 kb on - strand at 683.965 kb on - strand at 683.988 kb on + strand at 683.988 kb on + strand at 683.989 kb on - strand at 684.028 kb on + strand at 684.029 kb on - strand at 684.047 kb on + strand at 684.048 kb on - strand at 684.056 kb on + strand at 684.057 kb on - strand at 684.086 kb on + strand at 684.086 kb on + strand at 684.120 kb on + strand at 684.120 kb on + strand at 684.120 kb on + strand at 684.121 kb on - strand at 684.153 kb on + strand at 684.153 kb on + strand at 684.215 kb on + strand at 684.215 kb on + strand at 684.215 kb on + strand at 684.215 kb on + strand at 684.215 kb on + strand at 684.216 kb on - strand at 684.216 kb on - strand at 684.216 kb on - strand at 684.267 kb on - strand, within IAI47_03285 at 684.267 kb on - strand, within IAI47_03285 at 684.267 kb on - strand, within IAI47_03285 at 684.269 kb on + strand, within IAI47_03285 at 684.269 kb on + strand, within IAI47_03285 at 684.269 kb on + strand, within IAI47_03285 at 684.269 kb on + strand, within IAI47_03285 at 684.269 kb on + strand, within IAI47_03285 at 684.269 kb on + strand, within IAI47_03285 at 684.269 kb on + strand, within IAI47_03285 at 684.270 kb on - strand, within IAI47_03285 at 684.270 kb on - strand, within IAI47_03285 at 684.270 kb on - strand, within IAI47_03285 at 684.270 kb on - strand, within IAI47_03285 at 684.270 kb on - strand, within IAI47_03285 at 684.270 kb on - strand, within IAI47_03285 at 684.331 kb on + strand, within IAI47_03285 at 684.331 kb on + strand, within IAI47_03285 at 684.331 kb on + strand, within IAI47_03285 at 684.332 kb on - strand, within IAI47_03285 at 684.332 kb on - strand, within IAI47_03285 at 684.354 kb on + strand, within IAI47_03285 at 684.354 kb on + strand, within IAI47_03285 at 684.354 kb on + strand, within IAI47_03285 at 684.354 kb on + strand, within IAI47_03285 at 684.354 kb on + strand, within IAI47_03285 at 684.354 kb on + strand, within IAI47_03285 at 684.354 kb on + strand, within IAI47_03285 at 684.354 kb on + strand, within IAI47_03285 at 684.354 kb on + strand, within IAI47_03285 at 684.354 kb on + strand, within IAI47_03285 at 684.354 kb on + strand, within IAI47_03285 at 684.354 kb on + strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.355 kb on - strand, within IAI47_03285 at 684.540 kb on - strand, within IAI47_03285 at 684.540 kb on - strand, within IAI47_03285 at 684.556 kb on + strand, within IAI47_03285 at 684.556 kb on + strand, within IAI47_03285 at 684.556 kb on + strand, within IAI47_03285 at 684.556 kb on + strand, within IAI47_03285 at 684.557 kb on - strand, within IAI47_03285 at 684.557 kb on - strand, within IAI47_03285 at 684.557 kb on - strand, within IAI47_03285 at 684.644 kb on + strand, within IAI47_03285 at 684.644 kb on + strand, within IAI47_03285 at 684.645 kb on - strand, within IAI47_03285 at 684.652 kb on - strand, within IAI47_03285 at 684.672 kb on - strand, within IAI47_03285 at 684.837 kb on + strand, within IAI47_03285 at 684.837 kb on + strand, within IAI47_03285 at 684.838 kb on - strand, within IAI47_03285 at 684.838 kb on - strand, within IAI47_03285 at 684.851 kb on - strand, within IAI47_03285 at 684.851 kb on - strand, within IAI47_03285 at 684.870 kb on + strand, within IAI47_03285 at 684.870 kb on + strand, within IAI47_03285 at 684.871 kb on - strand, within IAI47_03285 at 684.871 kb on - strand, within IAI47_03285 at 684.911 kb on + strand, within IAI47_03285 at 684.911 kb on + strand, within IAI47_03285 at 684.912 kb on - strand, within IAI47_03285 at 684.912 kb on - strand, within IAI47_03285 at 684.912 kb on - strand, within IAI47_03285 at 684.912 kb on - strand, within IAI47_03285 at 684.912 kb on - strand, within IAI47_03285
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 5 uM, aerobic remove 680,909 + IAI47_03275 0.65 +0.4 680,909 + IAI47_03275 0.65 -0.1 680,943 + IAI47_03275 0.66 +1.4 680,944 - IAI47_03275 0.66 +0.6 680,950 - IAI47_03275 0.67 -0.2 681,097 + IAI47_03275 0.74 +1.4 681,097 + IAI47_03275 0.74 -1.7 681,097 + IAI47_03275 0.74 +0.2 681,098 - IAI47_03275 0.74 +1.6 681,277 + IAI47_03275 0.82 +0.2 681,277 + IAI47_03275 0.82 +0.2 681,277 + IAI47_03275 0.82 +0.3 681,277 + IAI47_03275 0.82 -1.0 681,277 + IAI47_03275 0.82 -0.5 681,277 + IAI47_03275 0.82 -0.1 681,278 - IAI47_03275 0.82 +0.9 681,278 - IAI47_03275 0.82 +0.3 681,320 - IAI47_03275 0.84 -0.2 681,320 - IAI47_03275 0.84 +0.2 681,320 - IAI47_03275 0.84 +0.7 681,397 + IAI47_03275 0.88 +0.4 681,397 + IAI47_03275 0.88 -1.9 681,398 - IAI47_03275 0.88 +0.2 681,400 + IAI47_03275 0.88 +0.0 681,401 - IAI47_03275 0.88 -0.1 681,401 - IAI47_03275 0.88 +0.6 681,401 - IAI47_03275 0.88 -0.2 681,401 - IAI47_03275 0.88 -1.3 681,401 - IAI47_03275 0.88 -1.3 681,401 - IAI47_03275 0.88 +0.6 681,401 - IAI47_03275 0.88 +1.0 681,469 + -0.1 681,554 + +0.1 681,554 + +2.2 681,554 + -0.1 681,555 - +0.6 681,555 - +0.3 681,555 - +0.0 681,588 + +0.5 681,588 + -1.3 681,588 + +0.2 681,588 + +0.9 681,588 + +0.3 681,665 + +1.3 681,665 + +0.4 681,667 + +0.3 681,736 - +1.1 681,739 + -0.0 681,739 + -0.7 681,740 - -0.2 681,740 - -0.1 681,766 - -1.6 681,766 - -0.1 681,770 - -0.3 681,770 - +0.5 681,770 - -0.0 681,770 - -0.9 681,802 + +0.2 681,802 + +0.0 681,802 + +0.0 681,802 + +1.2 681,802 + -1.2 681,802 + -0.6 681,802 + +1.4 681,802 + +0.7 681,802 + -1.2 681,802 + +0.1 681,802 + +0.3 681,803 - -0.6 681,803 - +0.4 681,803 - -1.1 681,803 - +0.0 681,803 - +0.3 681,803 - +0.8 681,803 - +0.6 681,803 - +0.2 681,807 + -0.2 681,807 + -1.2 681,807 + +0.2 681,807 + -0.4 681,807 + -0.8 681,807 + -0.3 681,808 - -0.5 681,818 + +0.4 681,819 - -2.1 681,819 - -0.1 681,819 - -0.1 681,829 + +1.5 681,829 + -0.1 681,871 + -0.9 681,871 + +0.8 681,879 + -0.4 681,879 + -1.2 681,879 + +0.1 681,879 + +0.6 681,879 + +0.8 681,879 + +0.4 681,879 + +0.3 681,879 + -2.0 681,879 + -0.4 681,880 - -0.0 681,880 - -0.0 681,880 - +0.6 681,883 + +0.3 681,883 + +0.3 681,884 - -1.3 681,884 - -0.1 681,884 - -0.1 681,982 + +0.2 681,982 + -0.3 681,983 - -0.8 682,022 + IAI47_03280 0.10 -0.2 682,022 + IAI47_03280 0.10 +1.1 682,023 - IAI47_03280 0.10 +2.3 682,023 - IAI47_03280 0.10 +0.7 682,074 + IAI47_03280 0.13 +0.9 682,075 - IAI47_03280 0.13 -1.1 682,169 + IAI47_03280 0.17 +0.2 682,169 + IAI47_03280 0.17 +1.2 682,170 - IAI47_03280 0.17 -0.8 682,170 - IAI47_03280 0.17 +0.4 682,170 - IAI47_03280 0.17 -0.8 682,170 - IAI47_03280 0.17 -0.3 682,171 + IAI47_03280 0.17 -0.5 682,171 + IAI47_03280 0.17 -2.1 682,171 + IAI47_03280 0.17 -0.0 682,172 - IAI47_03280 0.17 +0.6 682,227 + IAI47_03280 0.20 +1.7 682,285 + IAI47_03280 0.22 +1.1 682,285 + IAI47_03280 0.22 -1.7 682,286 - IAI47_03280 0.23 -0.4 682,327 + IAI47_03280 0.24 +0.1 682,328 - IAI47_03280 0.24 +0.1 682,328 - IAI47_03280 0.24 +0.0 682,328 - IAI47_03280 0.24 +0.7 682,342 - IAI47_03280 0.25 +0.2 682,373 + IAI47_03280 0.27 +0.7 682,373 + IAI47_03280 0.27 -0.4 682,374 - IAI47_03280 0.27 -0.6 682,374 - IAI47_03280 0.27 -1.0 682,438 + IAI47_03280 0.30 +1.1 682,438 + IAI47_03280 0.30 +0.6 682,438 + IAI47_03280 0.30 +1.2 682,438 + IAI47_03280 0.30 +0.8 682,439 - IAI47_03280 0.30 -0.4 682,439 - IAI47_03280 0.30 -1.7 682,439 - IAI47_03280 0.30 +1.0 682,464 + IAI47_03280 0.31 -0.6 682,465 - IAI47_03280 0.31 -2.7 682,471 + IAI47_03280 0.31 -1.4 682,471 + IAI47_03280 0.31 +1.1 682,471 + IAI47_03280 0.31 +0.5 682,472 - IAI47_03280 0.31 +1.3 682,472 - IAI47_03280 0.31 +1.4 682,489 + IAI47_03280 0.32 -0.0 682,489 + IAI47_03280 0.32 +0.8 682,490 - IAI47_03280 0.32 -0.2 682,696 + IAI47_03280 0.42 +0.1 682,697 - IAI47_03280 0.42 +0.6 682,715 - IAI47_03280 0.43 +0.8 682,802 + IAI47_03280 0.47 -1.1 682,802 + IAI47_03280 0.47 +0.7 682,802 + IAI47_03280 0.47 -0.2 682,802 + IAI47_03280 0.47 +0.5 682,802 + IAI47_03280 0.47 +0.7 682,802 + IAI47_03280 0.47 +0.3 682,805 + IAI47_03280 0.47 +0.1 682,805 + IAI47_03280 0.47 +1.7 682,805 + IAI47_03280 0.47 -0.0 682,805 + IAI47_03280 0.47 +0.7 682,805 + IAI47_03280 0.47 -0.2 682,806 - 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IAI47_03285 0.59 -0.6 684,912 - IAI47_03285 0.59 +0.6 684,912 - IAI47_03285 0.59 +1.1 684,912 - IAI47_03285 0.59 +1.1 684,912 - IAI47_03285 0.59 +0.3
Or see this region's nucleotide sequence