Experiment: R2A with perchlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS17500 and CA265_RS17505 are separated by 32 nucleotides CA265_RS17505 and CA265_RS17510 are separated by 339 nucleotides CA265_RS17510 and CA265_RS17515 are separated by 236 nucleotides
CA265_RS17500: CA265_RS17500 - hypothetical protein, at 4,363,285 to 4,364,130
_RS17500
CA265_RS17505: CA265_RS17505 - hypothetical protein, at 4,364,163 to 4,364,567
_RS17505
CA265_RS17510: CA265_RS17510 - diadenosine tetraphosphate hydrolase, at 4,364,907 to 4,365,425
_RS17510
CA265_RS17515: CA265_RS17515 - hypothetical protein, at 4,365,662 to 4,366,342
_RS17515
Position (kb)
4364
4365
4366 Strain fitness (log2 ratio)
-2
-1
0
1 at 4364.731 kb on - strand at 4364.808 kb on + strand at 4364.808 kb on + strand at 4364.812 kb on + strand at 4364.813 kb on - strand at 4364.813 kb on - strand at 4364.842 kb on + strand at 4364.926 kb on + strand at 4364.926 kb on + strand at 4365.023 kb on - strand, within CA265_RS17510 at 4365.025 kb on + strand, within CA265_RS17510 at 4365.025 kb on + strand, within CA265_RS17510 at 4365.107 kb on + strand, within CA265_RS17510 at 4365.119 kb on - strand, within CA265_RS17510 at 4365.119 kb on - strand, within CA265_RS17510 at 4365.122 kb on + strand, within CA265_RS17510 at 4365.209 kb on - strand, within CA265_RS17510 at 4365.215 kb on - strand, within CA265_RS17510 at 4365.220 kb on + strand, within CA265_RS17510 at 4365.240 kb on - strand, within CA265_RS17510 at 4365.323 kb on + strand, within CA265_RS17510 at 4365.396 kb on + strand at 4365.397 kb on - strand at 4365.434 kb on + strand at 4365.544 kb on - strand at 4365.553 kb on + strand at 4365.553 kb on + strand at 4365.554 kb on - strand at 4365.632 kb on + strand at 4365.658 kb on + strand at 4365.762 kb on + strand, within CA265_RS17515 at 4365.794 kb on - strand, within CA265_RS17515 at 4365.859 kb on - strand, within CA265_RS17515 at 4365.925 kb on + strand, within CA265_RS17515 at 4365.968 kb on + strand, within CA265_RS17515 at 4365.968 kb on + strand, within CA265_RS17515 at 4365.969 kb on - strand, within CA265_RS17515 at 4365.973 kb on + strand, within CA265_RS17515 at 4365.973 kb on + strand, within CA265_RS17515 at 4365.974 kb on - strand, within CA265_RS17515 at 4366.009 kb on + strand, within CA265_RS17515 at 4366.009 kb on + strand, within CA265_RS17515 at 4366.168 kb on + strand, within CA265_RS17515 at 4366.177 kb on + strand, within CA265_RS17515 at 4366.233 kb on - strand, within CA265_RS17515 at 4366.324 kb on + strand at 4366.423 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with perchlorate 6.25 mM remove 4,364,731 - -1.1 4,364,808 + -0.5 4,364,808 + -0.7 4,364,812 + -0.0 4,364,813 - -1.0 4,364,813 - -0.3 4,364,842 + +0.4 4,364,926 + +0.1 4,364,926 + -1.3 4,365,023 - CA265_RS17510 0.22 +0.1 4,365,025 + CA265_RS17510 0.23 -2.4 4,365,025 + CA265_RS17510 0.23 -0.2 4,365,107 + CA265_RS17510 0.39 -1.5 4,365,119 - CA265_RS17510 0.41 -0.7 4,365,119 - CA265_RS17510 0.41 -0.1 4,365,122 + CA265_RS17510 0.41 -1.1 4,365,209 - CA265_RS17510 0.58 -0.4 4,365,215 - CA265_RS17510 0.59 -0.1 4,365,220 + CA265_RS17510 0.60 -0.6 4,365,240 - CA265_RS17510 0.64 +0.1 4,365,323 + CA265_RS17510 0.80 -1.7 4,365,396 + +0.9 4,365,397 - -0.3 4,365,434 + -0.3 4,365,544 - -0.3 4,365,553 + -0.9 4,365,553 + -0.8 4,365,554 - -0.9 4,365,632 + -0.8 4,365,658 + -0.7 4,365,762 + CA265_RS17515 0.15 -0.4 4,365,794 - CA265_RS17515 0.19 +0.1 4,365,859 - CA265_RS17515 0.29 -2.1 4,365,925 + CA265_RS17515 0.39 +0.7 4,365,968 + CA265_RS17515 0.45 -1.0 4,365,968 + CA265_RS17515 0.45 -0.9 4,365,969 - CA265_RS17515 0.45 +0.5 4,365,973 + CA265_RS17515 0.46 +0.1 4,365,973 + CA265_RS17515 0.46 +0.1 4,365,974 - CA265_RS17515 0.46 -0.1 4,366,009 + CA265_RS17515 0.51 -0.5 4,366,009 + CA265_RS17515 0.51 +0.5 4,366,168 + CA265_RS17515 0.74 -0.6 4,366,177 + CA265_RS17515 0.76 -0.6 4,366,233 - CA265_RS17515 0.84 -0.5 4,366,324 + -0.3 4,366,423 + +0.3
Or see this region's nucleotide sequence