Experiment: R2A with perchlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS10950 and CA265_RS10955 are separated by 370 nucleotides CA265_RS10955 and CA265_RS10960 overlap by 17 nucleotides CA265_RS10960 and CA265_RS10965 are separated by 67 nucleotides CA265_RS10965 and CA265_RS10970 are separated by 331 nucleotides
CA265_RS10950: CA265_RS10950 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 2,694,579 to 2,695,274
_RS10950
CA265_RS10955: CA265_RS10955 - membrane protein insertion efficiency factor YidD, at 2,695,645 to 2,695,875
_RS10955
CA265_RS10960: CA265_RS10960 - ribonuclease P protein component, at 2,695,859 to 2,696,257
_RS10960
CA265_RS10965: CA265_RS10965 - 50S ribosomal protein L34, at 2,696,325 to 2,696,483
_RS10965
CA265_RS10970: CA265_RS10970 - hypothetical protein, at 2,696,815 to 2,697,150
_RS10970
Position (kb)
2695
2696 Strain fitness (log2 ratio)
-2
-1
0
1 at 2695.286 kb on - strand at 2695.289 kb on - strand at 2695.289 kb on - strand at 2695.460 kb on - strand at 2695.485 kb on - strand at 2695.517 kb on + strand at 2695.543 kb on + strand at 2695.543 kb on + strand at 2695.593 kb on + strand at 2695.633 kb on + strand at 2695.637 kb on - strand at 2695.637 kb on - strand at 2695.722 kb on + strand, within CA265_RS10955 at 2695.820 kb on + strand, within CA265_RS10955 at 2695.823 kb on - strand, within CA265_RS10955 at 2695.827 kb on + strand, within CA265_RS10955 at 2696.258 kb on - strand at 2696.626 kb on + strand at 2696.669 kb on - strand at 2696.671 kb on + strand at 2696.671 kb on + strand at 2696.675 kb on + strand at 2696.675 kb on + strand at 2696.698 kb on - strand at 2696.797 kb on - strand at 2696.799 kb on + strand at 2696.841 kb on + strand at 2696.842 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with perchlorate 6.25 mM remove 2,695,286 - -0.3 2,695,289 - -0.0 2,695,289 - -0.7 2,695,460 - +0.7 2,695,485 - -0.5 2,695,517 + -0.1 2,695,543 + -0.0 2,695,543 + +0.7 2,695,593 + -1.1 2,695,633 + +0.1 2,695,637 - -0.3 2,695,637 - +0.2 2,695,722 + CA265_RS10955 0.33 -1.0 2,695,820 + CA265_RS10955 0.76 -0.4 2,695,823 - CA265_RS10955 0.77 -1.8 2,695,827 + CA265_RS10955 0.79 -2.0 2,696,258 - -0.4 2,696,626 + -0.2 2,696,669 - +0.6 2,696,671 + +0.2 2,696,671 + -0.2 2,696,675 + +0.3 2,696,675 + +0.3 2,696,698 - -0.4 2,696,797 - -0.4 2,696,799 + -0.2 2,696,841 + -0.1 2,696,842 - +0.1
Or see this region's nucleotide sequence