Experiment: R2A with perchlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS10915 and CA265_RS10920 are separated by 784 nucleotides CA265_RS10920 and CA265_RS10925 are separated by 80 nucleotides CA265_RS10925 and CA265_RS10930 are separated by 92 nucleotides
CA265_RS10915: CA265_RS10915 - hypothetical protein, at 2,686,065 to 2,686,544
_RS10915
CA265_RS10920: CA265_RS10920 - SsrA-binding protein, at 2,687,329 to 2,687,778
_RS10920
CA265_RS10925: CA265_RS10925 - protein-L-isoaspartate O-methyltransferase, at 2,687,859 to 2,688,515
_RS10925
CA265_RS10930: CA265_RS10930 - primosomal protein N', at 2,688,608 to 2,691,088
_RS10930
Position (kb)
2687
2688 Strain fitness (log2 ratio)
-2
-1
0
1 at 2686.450 kb on + strand, within CA265_RS10915 at 2686.594 kb on + strand at 2686.596 kb on + strand at 2686.597 kb on - strand at 2686.817 kb on + strand at 2686.818 kb on - strand at 2686.835 kb on + strand at 2686.840 kb on - strand at 2686.973 kb on - strand at 2687.093 kb on - strand at 2687.093 kb on - strand at 2687.205 kb on + strand at 2687.205 kb on + strand at 2687.207 kb on + strand at 2687.208 kb on - strand at 2687.229 kb on + strand at 2687.283 kb on + strand at 2687.284 kb on - strand at 2687.285 kb on + strand at 2687.295 kb on + strand at 2687.297 kb on + strand at 2687.312 kb on + strand at 2687.392 kb on + strand, within CA265_RS10920 at 2687.478 kb on + strand, within CA265_RS10920 at 2687.493 kb on - strand, within CA265_RS10920 at 2687.494 kb on + strand, within CA265_RS10920 at 2687.573 kb on + strand, within CA265_RS10920 at 2687.627 kb on - strand, within CA265_RS10920 at 2687.730 kb on + strand, within CA265_RS10920 at 2687.743 kb on - strand at 2687.857 kb on + strand at 2687.857 kb on + strand at 2687.858 kb on - strand at 2688.409 kb on - strand, within CA265_RS10925 at 2688.548 kb on + strand at 2688.610 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with perchlorate 6.25 mM remove 2,686,450 + CA265_RS10915 0.80 +0.3 2,686,594 + +0.7 2,686,596 + +0.8 2,686,597 - -0.5 2,686,817 + +1.0 2,686,818 - +0.0 2,686,835 + -0.8 2,686,840 - +0.3 2,686,973 - +0.4 2,687,093 - -0.9 2,687,093 - +0.6 2,687,205 + +0.7 2,687,205 + +0.1 2,687,207 + +0.7 2,687,208 - +0.3 2,687,229 + +0.1 2,687,283 + -1.0 2,687,284 - -0.4 2,687,285 + -1.0 2,687,295 + +0.2 2,687,297 + +0.0 2,687,312 + +0.8 2,687,392 + CA265_RS10920 0.14 -1.2 2,687,478 + CA265_RS10920 0.33 -0.6 2,687,493 - CA265_RS10920 0.36 -0.4 2,687,494 + CA265_RS10920 0.37 -0.6 2,687,573 + CA265_RS10920 0.54 -1.2 2,687,627 - CA265_RS10920 0.66 -2.5 2,687,730 + CA265_RS10920 0.89 +0.3 2,687,743 - -0.2 2,687,857 + -0.3 2,687,857 + +0.5 2,687,858 - +0.2 2,688,409 - CA265_RS10925 0.84 +0.5 2,688,548 + +0.3 2,688,610 - -1.4
Or see this region's nucleotide sequence