Experiment: R2A with perchlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02565 and CA265_RS02570 are separated by 266 nucleotides CA265_RS02570 and CA265_RS02575 are separated by 227 nucleotides CA265_RS02575 and CA265_RS02580 are separated by 63 nucleotides
CA265_RS02565: CA265_RS02565 - hypothetical protein, at 644,466 to 645,068
_RS02565
CA265_RS02570: CA265_RS02570 - GNAT family N-acetyltransferase, at 645,335 to 645,817
_RS02570
CA265_RS02575: CA265_RS02575 - hypothetical protein, at 646,045 to 646,560
_RS02575
CA265_RS02580: CA265_RS02580 - hypothetical protein, at 646,624 to 647,565
_RS02580
Position (kb) 646
647 Strain fitness (log2 ratio) -2
-1
0
1 at 645.048 kb on + strand at 645.049 kb on - strand at 645.049 kb on - strand at 645.051 kb on + strand at 645.052 kb on - strand at 645.090 kb on + strand at 645.091 kb on - strand at 645.092 kb on + strand at 645.092 kb on + strand at 645.092 kb on + strand at 645.093 kb on - strand at 645.118 kb on + strand at 645.118 kb on + strand at 645.260 kb on + strand at 645.260 kb on + strand at 645.277 kb on - strand at 645.316 kb on - strand at 645.370 kb on + strand at 645.374 kb on - strand at 645.442 kb on + strand, within CA265_RS02570 at 645.442 kb on + strand, within CA265_RS02570 at 645.546 kb on - strand, within CA265_RS02570 at 645.709 kb on + strand, within CA265_RS02570 at 645.710 kb on - strand, within CA265_RS02570 at 645.725 kb on - strand, within CA265_RS02570 at 645.791 kb on - strand at 645.832 kb on + strand at 645.940 kb on + strand at 645.940 kb on + strand at 646.010 kb on + strand at 646.057 kb on + strand at 646.062 kb on + strand at 646.062 kb on + strand at 646.217 kb on + strand, within CA265_RS02575 at 646.283 kb on + strand, within CA265_RS02575 at 646.284 kb on - strand, within CA265_RS02575 at 646.291 kb on - strand, within CA265_RS02575 at 646.305 kb on + strand, within CA265_RS02575 at 646.306 kb on - strand, within CA265_RS02575 at 646.366 kb on - strand, within CA265_RS02575 at 646.522 kb on + strand at 646.523 kb on - strand at 646.523 kb on - strand at 646.564 kb on + strand at 646.565 kb on - strand at 646.617 kb on + strand at 646.660 kb on + strand at 646.743 kb on + strand, within CA265_RS02580 at 646.744 kb on - strand, within CA265_RS02580 at 646.805 kb on - strand, within CA265_RS02580 at 646.805 kb on - strand, within CA265_RS02580 at 646.833 kb on + strand, within CA265_RS02580 at 646.833 kb on + strand, within CA265_RS02580 at 646.873 kb on - strand, within CA265_RS02580 at 646.876 kb on - strand, within CA265_RS02580 at 646.886 kb on + strand, within CA265_RS02580 at 646.941 kb on - strand, within CA265_RS02580 at 647.019 kb on + strand, within CA265_RS02580 at 647.116 kb on - strand, within CA265_RS02580 at 647.120 kb on + strand, within CA265_RS02580 at 647.125 kb on - strand, within CA265_RS02580 at 647.138 kb on + strand, within CA265_RS02580 at 647.138 kb on + strand, within CA265_RS02580 at 647.139 kb on - strand, within CA265_RS02580 at 647.142 kb on + strand, within CA265_RS02580 at 647.143 kb on - strand, within CA265_RS02580 at 647.143 kb on - strand, within CA265_RS02580 at 647.210 kb on + strand, within CA265_RS02580 at 647.211 kb on - strand, within CA265_RS02580 at 647.211 kb on - strand, within CA265_RS02580 at 647.211 kb on - strand, within CA265_RS02580 at 647.376 kb on - strand, within CA265_RS02580 at 647.393 kb on - strand, within CA265_RS02580 at 647.497 kb on - strand at 647.557 kb on + strand at 647.557 kb on + strand at 647.558 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with perchlorate 6.25 mM remove 645,048 + -0.5 645,049 - +1.1 645,049 - +0.8 645,051 + -0.2 645,052 - -0.2 645,090 + +0.7 645,091 - -1.6 645,092 + -1.2 645,092 + -0.1 645,092 + -1.3 645,093 - +0.4 645,118 + +0.5 645,118 + +0.6 645,260 + +0.5 645,260 + +0.5 645,277 - -0.7 645,316 - -0.0 645,370 + +0.2 645,374 - +0.3 645,442 + CA265_RS02570 0.22 -0.3 645,442 + CA265_RS02570 0.22 +0.0 645,546 - CA265_RS02570 0.44 -0.8 645,709 + CA265_RS02570 0.77 +0.3 645,710 - CA265_RS02570 0.78 -0.3 645,725 - CA265_RS02570 0.81 -0.4 645,791 - -0.7 645,832 + -1.8 645,940 + -0.5 645,940 + -0.1 646,010 + +0.1 646,057 + -0.1 646,062 + +0.2 646,062 + -0.8 646,217 + CA265_RS02575 0.33 +1.1 646,283 + CA265_RS02575 0.46 -0.6 646,284 - CA265_RS02575 0.46 -0.6 646,291 - CA265_RS02575 0.48 -1.1 646,305 + CA265_RS02575 0.50 -1.0 646,306 - CA265_RS02575 0.51 +0.1 646,366 - CA265_RS02575 0.62 -0.6 646,522 + -0.4 646,523 - +0.9 646,523 - +0.5 646,564 + -0.6 646,565 - +0.3 646,617 + +1.3 646,660 + +0.1 646,743 + CA265_RS02580 0.13 +1.2 646,744 - CA265_RS02580 0.13 -0.2 646,805 - CA265_RS02580 0.19 +1.1 646,805 - CA265_RS02580 0.19 +0.2 646,833 + CA265_RS02580 0.22 -0.1 646,833 + CA265_RS02580 0.22 -0.8 646,873 - CA265_RS02580 0.26 +1.0 646,876 - CA265_RS02580 0.27 +0.1 646,886 + CA265_RS02580 0.28 -0.8 646,941 - CA265_RS02580 0.34 +1.5 647,019 + CA265_RS02580 0.42 +0.8 647,116 - CA265_RS02580 0.52 -0.2 647,120 + CA265_RS02580 0.53 -1.1 647,125 - CA265_RS02580 0.53 -0.1 647,138 + CA265_RS02580 0.55 -0.5 647,138 + CA265_RS02580 0.55 -1.2 647,139 - CA265_RS02580 0.55 -0.8 647,142 + CA265_RS02580 0.55 -1.7 647,143 - CA265_RS02580 0.55 -0.5 647,143 - CA265_RS02580 0.55 +0.2 647,210 + CA265_RS02580 0.62 -0.0 647,211 - CA265_RS02580 0.62 +0.1 647,211 - CA265_RS02580 0.62 -0.6 647,211 - CA265_RS02580 0.62 -0.1 647,376 - CA265_RS02580 0.80 -0.6 647,393 - CA265_RS02580 0.82 -0.3 647,497 - -1.5 647,557 + -0.8 647,557 + +1.1 647,558 - +0.1
Or see this region's nucleotide sequence