Experiment: R2A with perchlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS01890 and CA265_RS01895 are separated by 109 nucleotides CA265_RS01895 and CA265_RS01900 are separated by 1 nucleotides CA265_RS01900 and CA265_RS01905 are separated by 814 nucleotides
CA265_RS01890: CA265_RS01890 - hypothetical protein, at 471,681 to 472,334
_RS01890
CA265_RS01895: CA265_RS01895 - hypothetical protein, at 472,444 to 472,824
_RS01895
CA265_RS01900: CA265_RS01900 - hypothetical protein, at 472,826 to 473,029
_RS01900
CA265_RS01905: CA265_RS01905 - hypothetical protein, at 473,844 to 476,279
_RS01905
Position (kb) 472
473
474 Strain fitness (log2 ratio) -2
-1
0
1 at 471.828 kb on + strand, within CA265_RS01890 at 471.936 kb on - strand, within CA265_RS01890 at 471.952 kb on - strand, within CA265_RS01890 at 471.953 kb on + strand, within CA265_RS01890 at 471.954 kb on - strand, within CA265_RS01890 at 471.962 kb on - strand, within CA265_RS01890 at 471.978 kb on - strand, within CA265_RS01890 at 471.978 kb on - strand, within CA265_RS01890 at 471.986 kb on - strand, within CA265_RS01890 at 472.007 kb on + strand, within CA265_RS01890 at 472.042 kb on - strand, within CA265_RS01890 at 472.043 kb on + strand, within CA265_RS01890 at 472.043 kb on + strand, within CA265_RS01890 at 472.044 kb on - strand, within CA265_RS01890 at 472.099 kb on + strand, within CA265_RS01890 at 472.116 kb on - strand, within CA265_RS01890 at 472.134 kb on - strand, within CA265_RS01890 at 472.134 kb on - strand, within CA265_RS01890 at 472.182 kb on - strand, within CA265_RS01890 at 472.271 kb on - strand at 472.332 kb on + strand at 472.339 kb on + strand at 472.357 kb on - strand at 472.401 kb on - strand at 472.404 kb on - strand at 472.408 kb on + strand at 472.409 kb on - strand at 472.518 kb on + strand, within CA265_RS01895 at 472.518 kb on + strand, within CA265_RS01895 at 472.529 kb on + strand, within CA265_RS01895 at 472.554 kb on + strand, within CA265_RS01895 at 472.598 kb on + strand, within CA265_RS01895 at 472.599 kb on - strand, within CA265_RS01895 at 472.699 kb on + strand, within CA265_RS01895 at 472.755 kb on + strand, within CA265_RS01895 at 472.863 kb on - strand, within CA265_RS01900 at 472.876 kb on - strand, within CA265_RS01900 at 472.975 kb on - strand, within CA265_RS01900 at 472.978 kb on + strand, within CA265_RS01900 at 472.991 kb on - strand, within CA265_RS01900 at 472.996 kb on + strand, within CA265_RS01900 at 473.087 kb on - strand at 473.117 kb on - strand at 473.160 kb on - strand at 473.214 kb on + strand at 473.214 kb on + strand at 473.214 kb on + strand at 473.216 kb on + strand at 473.261 kb on - strand at 473.261 kb on - strand at 473.264 kb on - strand at 473.270 kb on + strand at 473.270 kb on + strand at 473.299 kb on - strand at 473.489 kb on - strand at 473.639 kb on - strand at 473.693 kb on + strand at 473.693 kb on + strand at 473.693 kb on + strand at 473.693 kb on + strand at 473.694 kb on - strand at 473.698 kb on + strand at 473.699 kb on - strand at 473.730 kb on - strand at 473.837 kb on + strand at 473.986 kb on + strand at 473.987 kb on - strand at 473.988 kb on + strand at 474.029 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with perchlorate 6.25 mM remove 471,828 + CA265_RS01890 0.22 -0.8 471,936 - CA265_RS01890 0.39 +0.1 471,952 - CA265_RS01890 0.41 +0.3 471,953 + CA265_RS01890 0.42 -1.0 471,954 - CA265_RS01890 0.42 +0.2 471,962 - CA265_RS01890 0.43 +0.4 471,978 - CA265_RS01890 0.45 -0.1 471,978 - CA265_RS01890 0.45 -0.9 471,986 - CA265_RS01890 0.47 +0.1 472,007 + CA265_RS01890 0.50 -1.0 472,042 - CA265_RS01890 0.55 +0.1 472,043 + CA265_RS01890 0.55 +0.6 472,043 + CA265_RS01890 0.55 -0.5 472,044 - CA265_RS01890 0.56 -1.1 472,099 + CA265_RS01890 0.64 +0.1 472,116 - CA265_RS01890 0.67 -1.0 472,134 - CA265_RS01890 0.69 -2.3 472,134 - CA265_RS01890 0.69 +0.1 472,182 - CA265_RS01890 0.77 -0.8 472,271 - -0.6 472,332 + +0.3 472,339 + +0.1 472,357 - -0.1 472,401 - -0.8 472,404 - +0.3 472,408 + -1.0 472,409 - -0.2 472,518 + CA265_RS01895 0.19 +0.0 472,518 + CA265_RS01895 0.19 -0.0 472,529 + CA265_RS01895 0.22 -0.8 472,554 + CA265_RS01895 0.29 -1.8 472,598 + CA265_RS01895 0.40 +0.3 472,599 - CA265_RS01895 0.41 -0.6 472,699 + CA265_RS01895 0.67 +0.1 472,755 + CA265_RS01895 0.82 +0.2 472,863 - CA265_RS01900 0.18 -2.0 472,876 - CA265_RS01900 0.25 +0.2 472,975 - CA265_RS01900 0.73 -1.2 472,978 + CA265_RS01900 0.75 -0.9 472,991 - CA265_RS01900 0.81 -0.2 472,996 + CA265_RS01900 0.83 -0.6 473,087 - -0.1 473,117 - +1.6 473,160 - -1.4 473,214 + -0.1 473,214 + +0.1 473,214 + -0.2 473,216 + -1.3 473,261 - -0.4 473,261 - -0.2 473,264 - +0.1 473,270 + +0.0 473,270 + +1.6 473,299 - -0.0 473,489 - +0.4 473,639 - -0.5 473,693 + -0.3 473,693 + -1.4 473,693 + -0.8 473,693 + -0.0 473,694 - -0.6 473,698 + +1.2 473,699 - +0.0 473,730 - +0.6 473,837 + -0.5 473,986 + -0.6 473,987 - -0.2 473,988 + +0.0 474,029 + -0.9
Or see this region's nucleotide sequence