Experiment: R2A with perchlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS00230 and CA265_RS00235 are separated by 150 nucleotides CA265_RS00235 and CA265_RS00240 are separated by 5 nucleotides
CA265_RS00230: CA265_RS00230 - hypothetical protein, at 56,398 to 57,468
_RS00230
CA265_RS00235: CA265_RS00235 - hypothetical protein, at 57,619 to 57,867
_RS00235
CA265_RS00240: CA265_RS00240 - histidine kinase, at 57,873 to 59,003
_RS00240
Position (kb) 57
58 Strain fitness (log2 ratio) -1
0
1 at 56.691 kb on - strand, within CA265_RS00230 at 56.829 kb on + strand, within CA265_RS00230 at 56.851 kb on + strand, within CA265_RS00230 at 56.854 kb on + strand, within CA265_RS00230 at 56.878 kb on + strand, within CA265_RS00230 at 56.879 kb on - strand, within CA265_RS00230 at 56.887 kb on - strand, within CA265_RS00230 at 56.917 kb on + strand, within CA265_RS00230 at 56.918 kb on - strand, within CA265_RS00230 at 56.962 kb on - strand, within CA265_RS00230 at 57.003 kb on + strand, within CA265_RS00230 at 57.003 kb on + strand, within CA265_RS00230 at 57.085 kb on + strand, within CA265_RS00230 at 57.085 kb on + strand, within CA265_RS00230 at 57.091 kb on - strand, within CA265_RS00230 at 57.171 kb on + strand, within CA265_RS00230 at 57.210 kb on + strand, within CA265_RS00230 at 57.253 kb on + strand, within CA265_RS00230 at 57.254 kb on - strand, within CA265_RS00230 at 57.316 kb on + strand, within CA265_RS00230 at 57.334 kb on + strand, within CA265_RS00230 at 57.601 kb on - strand at 57.619 kb on + strand at 57.633 kb on - strand at 57.663 kb on - strand, within CA265_RS00235 at 57.663 kb on - strand, within CA265_RS00235 at 57.787 kb on - strand, within CA265_RS00235 at 57.831 kb on - strand, within CA265_RS00235 at 57.848 kb on + strand at 57.993 kb on - strand, within CA265_RS00240 at 58.126 kb on - strand, within CA265_RS00240 at 58.126 kb on - strand, within CA265_RS00240 at 58.146 kb on + strand, within CA265_RS00240 at 58.190 kb on + strand, within CA265_RS00240 at 58.212 kb on - strand, within CA265_RS00240 at 58.367 kb on + strand, within CA265_RS00240 at 58.381 kb on + strand, within CA265_RS00240 at 58.390 kb on + strand, within CA265_RS00240 at 58.390 kb on + strand, within CA265_RS00240 at 58.562 kb on - strand, within CA265_RS00240 at 58.660 kb on + strand, within CA265_RS00240 at 58.689 kb on + strand, within CA265_RS00240 at 58.716 kb on + strand, within CA265_RS00240 at 58.716 kb on + strand, within CA265_RS00240 at 58.833 kb on - strand, within CA265_RS00240 at 58.855 kb on + strand, within CA265_RS00240
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with perchlorate 6.25 mM remove 56,691 - CA265_RS00230 0.27 -0.0 56,829 + CA265_RS00230 0.40 -1.0 56,851 + CA265_RS00230 0.42 -0.7 56,854 + CA265_RS00230 0.43 -0.2 56,878 + CA265_RS00230 0.45 -0.5 56,879 - CA265_RS00230 0.45 -1.3 56,887 - CA265_RS00230 0.46 +0.4 56,917 + CA265_RS00230 0.48 +0.6 56,918 - CA265_RS00230 0.49 -0.3 56,962 - CA265_RS00230 0.53 +0.1 57,003 + CA265_RS00230 0.56 +0.1 57,003 + CA265_RS00230 0.56 -0.7 57,085 + CA265_RS00230 0.64 +0.6 57,085 + CA265_RS00230 0.64 +1.2 57,091 - CA265_RS00230 0.65 -0.1 57,171 + CA265_RS00230 0.72 +0.6 57,210 + CA265_RS00230 0.76 -1.1 57,253 + CA265_RS00230 0.80 -0.9 57,254 - CA265_RS00230 0.80 -0.4 57,316 + CA265_RS00230 0.86 +0.3 57,334 + CA265_RS00230 0.87 -0.3 57,601 - -0.7 57,619 + -0.3 57,633 - -0.1 57,663 - CA265_RS00235 0.18 -1.0 57,663 - CA265_RS00235 0.18 -0.3 57,787 - CA265_RS00235 0.67 -0.8 57,831 - CA265_RS00235 0.85 -0.4 57,848 + +0.4 57,993 - CA265_RS00240 0.11 -0.1 58,126 - CA265_RS00240 0.22 +0.0 58,126 - CA265_RS00240 0.22 -0.4 58,146 + CA265_RS00240 0.24 +0.2 58,190 + CA265_RS00240 0.28 +0.9 58,212 - CA265_RS00240 0.30 -1.2 58,367 + CA265_RS00240 0.44 +0.3 58,381 + CA265_RS00240 0.45 -1.2 58,390 + CA265_RS00240 0.46 -0.3 58,390 + CA265_RS00240 0.46 +0.7 58,562 - CA265_RS00240 0.61 +0.4 58,660 + CA265_RS00240 0.70 -0.6 58,689 + CA265_RS00240 0.72 -0.6 58,716 + CA265_RS00240 0.75 -0.2 58,716 + CA265_RS00240 0.75 -1.3 58,833 - CA265_RS00240 0.85 +0.8 58,855 + CA265_RS00240 0.87 +1.5
Or see this region's nucleotide sequence