Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02135 and AO353_02140 are separated by 270 nucleotides AO353_02140 and AO353_02145 are separated by 13 nucleotides AO353_02145 and AO353_02150 are separated by 192 nucleotides
AO353_02135: AO353_02135 - hypothetical protein, at 458,668 to 459,609
_02135
AO353_02140: AO353_02140 - BolA family transcriptional regulator, at 459,880 to 460,179
_02140
AO353_02145: AO353_02145 - hypothetical protein, at 460,193 to 460,717
_02145
AO353_02150: AO353_02150 - fumarate hydratase, at 460,910 to 462,304
_02150
Position (kb) 460
461 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 459.201 kb on - strand, within AO353_02135 at 459.201 kb on - strand, within AO353_02135 at 459.201 kb on - strand, within AO353_02135 at 459.272 kb on + strand, within AO353_02135 at 459.272 kb on + strand, within AO353_02135 at 459.272 kb on + strand, within AO353_02135 at 459.272 kb on + strand, within AO353_02135 at 459.272 kb on + strand, within AO353_02135 at 459.272 kb on + strand, within AO353_02135 at 459.272 kb on + strand, within AO353_02135 at 459.272 kb on + strand, within AO353_02135 at 459.273 kb on - strand, within AO353_02135 at 459.273 kb on - strand, within AO353_02135 at 459.273 kb on - strand, within AO353_02135 at 459.273 kb on - strand, within AO353_02135 at 459.273 kb on - strand, within AO353_02135 at 459.273 kb on - strand, within AO353_02135 at 459.273 kb on - strand, within AO353_02135 at 459.273 kb on - strand, within AO353_02135 at 459.273 kb on - strand, within AO353_02135 at 459.273 kb on - strand, within AO353_02135 at 459.273 kb on - strand, within AO353_02135 at 459.273 kb on - strand, within AO353_02135 at 459.374 kb on + strand, within AO353_02135 at 459.374 kb on + strand, within AO353_02135 at 459.374 kb on + strand, within AO353_02135 at 459.554 kb on + strand at 459.554 kb on + strand at 459.554 kb on + strand at 459.555 kb on - strand at 459.576 kb on + strand at 459.576 kb on + strand at 459.576 kb on + strand at 459.576 kb on + strand at 459.576 kb on + strand at 459.576 kb on + strand at 459.576 kb on + strand at 459.577 kb on - strand at 459.577 kb on - strand at 459.577 kb on - strand at 459.577 kb on - strand at 459.577 kb on - strand at 459.577 kb on - strand at 459.577 kb on - strand at 459.577 kb on - strand at 459.577 kb on - strand at 459.577 kb on - strand at 459.577 kb on - strand at 459.577 kb on - strand at 459.577 kb on - strand at 459.578 kb on + strand at 459.578 kb on + strand at 459.578 kb on + strand at 459.578 kb on + strand at 459.578 kb on + strand at 459.578 kb on + strand at 459.578 kb on + strand at 459.578 kb on + strand at 459.578 kb on + strand at 459.578 kb on + strand at 459.578 kb on + strand at 459.578 kb on + strand at 459.578 kb on + strand at 459.578 kb on + strand at 459.579 kb on - strand at 459.579 kb on - strand at 459.579 kb on - strand at 459.579 kb on - strand at 459.715 kb on + strand at 459.778 kb on - strand at 459.821 kb on - strand at 459.824 kb on - strand at 459.824 kb on - strand at 459.824 kb on - strand at 459.951 kb on + strand, within AO353_02140 at 459.951 kb on + strand, within AO353_02140 at 459.951 kb on + strand, within AO353_02140 at 459.952 kb on - strand, within AO353_02140 at 459.952 kb on - strand, within AO353_02140 at 459.952 kb on - strand, within AO353_02140 at 459.953 kb on + strand, within AO353_02140 at 459.953 kb on + strand, within AO353_02140 at 459.953 kb on + strand, within AO353_02140 at 459.953 kb on + strand, within AO353_02140 at 459.953 kb on + strand, within AO353_02140 at 459.953 kb on + strand, within AO353_02140 at 459.953 kb on + strand, within AO353_02140 at 459.953 kb on + strand, within AO353_02140 at 459.953 kb on + strand, within AO353_02140 at 459.953 kb on + strand, within AO353_02140 at 459.953 kb on + strand, within AO353_02140 at 459.953 kb on + strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.954 kb on - strand, within AO353_02140 at 459.957 kb on + strand, within AO353_02140 at 459.957 kb on + strand, within AO353_02140 at 459.957 kb on + strand, within AO353_02140 at 459.957 kb on + strand, within AO353_02140 at 459.957 kb on + strand, within AO353_02140 at 459.957 kb on + strand, within AO353_02140 at 459.957 kb on + strand, within AO353_02140 at 459.958 kb on - strand, within AO353_02140 at 459.958 kb on - strand, within AO353_02140 at 459.958 kb on - strand, within AO353_02140 at 459.958 kb on - strand, within AO353_02140 at 459.958 kb on - strand, within AO353_02140 at 459.958 kb on - strand, within AO353_02140 at 459.958 kb on - strand, within AO353_02140 at 460.008 kb on - strand, within AO353_02140 at 460.101 kb on + strand, within AO353_02140 at 460.101 kb on + strand, within AO353_02140 at 460.101 kb on + strand, within AO353_02140 at 460.101 kb on + strand, within AO353_02140 at 460.101 kb on + strand, within AO353_02140 at 460.102 kb on - strand, within AO353_02140 at 460.102 kb on - strand, within AO353_02140 at 460.102 kb on - strand, within AO353_02140 at 460.102 kb on - strand, within AO353_02140 at 460.102 kb on - strand, within AO353_02140 at 460.102 kb on - strand, within AO353_02140 at 460.102 kb on - strand, within AO353_02140 at 460.102 kb on - strand, within AO353_02140 at 460.161 kb on + strand at 460.161 kb on + strand at 460.161 kb on + strand at 460.371 kb on + strand, within AO353_02145 at 460.372 kb on - strand, within AO353_02145 at 460.372 kb on - strand, within AO353_02145 at 460.419 kb on + strand, within AO353_02145 at 460.419 kb on + strand, within AO353_02145 at 460.419 kb on + strand, within AO353_02145 at 460.420 kb on - strand, within AO353_02145 at 460.420 kb on - strand, within AO353_02145 at 460.420 kb on - strand, within AO353_02145 at 460.420 kb on - strand, within AO353_02145 at 460.494 kb on + strand, within AO353_02145 at 460.494 kb on + strand, within AO353_02145 at 460.495 kb on - strand, within AO353_02145 at 460.575 kb on + strand, within AO353_02145 at 460.575 kb on + strand, within AO353_02145 at 460.575 kb on + strand, within AO353_02145 at 460.575 kb on + strand, within AO353_02145 at 460.575 kb on + strand, within AO353_02145 at 460.575 kb on + strand, within AO353_02145 at 460.575 kb on + strand, within AO353_02145 at 460.575 kb on + strand, within AO353_02145 at 460.576 kb on - strand, within AO353_02145 at 460.576 kb on - strand, within AO353_02145 at 460.693 kb on + strand at 460.694 kb on - strand at 460.732 kb on + strand at 460.732 kb on + strand at 460.732 kb on + strand at 460.732 kb on + strand at 460.733 kb on - strand at 460.744 kb on + strand at 460.745 kb on - strand at 460.745 kb on - strand at 460.857 kb on + strand at 460.858 kb on - strand at 460.875 kb on + strand at 460.875 kb on + strand at 460.875 kb on + strand at 460.875 kb on + strand at 460.875 kb on + strand at 460.876 kb on - strand at 460.894 kb on + strand at 460.894 kb on + strand at 460.895 kb on - strand at 460.905 kb on - strand at 460.964 kb on + strand at 460.964 kb on + strand at 460.964 kb on + strand at 460.964 kb on + strand at 460.964 kb on + strand at 460.965 kb on - strand at 460.965 kb on - strand at 460.996 kb on + strand at 460.997 kb on - strand at 461.034 kb on + strand at 461.080 kb on + strand, within AO353_02150 at 461.080 kb on + strand, within AO353_02150 at 461.351 kb on - strand, within AO353_02150 at 461.371 kb on - strand, within AO353_02150 at 461.371 kb on - strand, within AO353_02150
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 459,201 - AO353_02135 0.57 +0.7 459,201 - AO353_02135 0.57 -1.2 459,201 - AO353_02135 0.57 -0.5 459,272 + AO353_02135 0.64 +0.1 459,272 + AO353_02135 0.64 -0.5 459,272 + AO353_02135 0.64 +0.1 459,272 + AO353_02135 0.64 -0.2 459,272 + AO353_02135 0.64 +0.1 459,272 + AO353_02135 0.64 -0.5 459,272 + AO353_02135 0.64 +0.0 459,272 + AO353_02135 0.64 +1.1 459,273 - AO353_02135 0.64 -0.1 459,273 - AO353_02135 0.64 -0.1 459,273 - AO353_02135 0.64 +0.7 459,273 - AO353_02135 0.64 -0.3 459,273 - AO353_02135 0.64 -0.3 459,273 - AO353_02135 0.64 +0.2 459,273 - AO353_02135 0.64 -0.7 459,273 - AO353_02135 0.64 -0.5 459,273 - AO353_02135 0.64 -0.9 459,273 - AO353_02135 0.64 +0.3 459,273 - AO353_02135 0.64 -0.3 459,273 - AO353_02135 0.64 +0.7 459,374 + AO353_02135 0.75 -1.6 459,374 + AO353_02135 0.75 +0.1 459,374 + AO353_02135 0.75 +1.0 459,554 + -1.8 459,554 + +0.4 459,554 + +1.0 459,555 - +0.4 459,576 + -0.2 459,576 + -2.3 459,576 + +0.7 459,576 + +0.6 459,576 + +1.0 459,576 + +1.1 459,576 + +0.7 459,577 - +0.1 459,577 - -0.8 459,577 - +0.8 459,577 - +0.7 459,577 - +0.3 459,577 - +1.3 459,577 - -0.1 459,577 - -0.2 459,577 - -0.3 459,577 - -1.1 459,577 - +0.2 459,577 - +0.4 459,577 - +0.1 459,578 + +0.5 459,578 + -0.3 459,578 + -1.5 459,578 + -0.3 459,578 + -1.2 459,578 + -0.7 459,578 + -1.4 459,578 + +0.5 459,578 + +0.9 459,578 + -1.0 459,578 + +0.2 459,578 + -0.3 459,578 + -0.5 459,578 + -0.6 459,579 - +0.7 459,579 - -0.1 459,579 - -0.3 459,579 - +0.7 459,715 + -0.5 459,778 - +0.9 459,821 - -0.7 459,824 - +0.2 459,824 - +2.1 459,824 - -1.4 459,951 + AO353_02140 0.24 -0.0 459,951 + AO353_02140 0.24 -2.7 459,951 + AO353_02140 0.24 -1.3 459,952 - AO353_02140 0.24 -1.1 459,952 - AO353_02140 0.24 -0.9 459,952 - AO353_02140 0.24 -0.3 459,953 + AO353_02140 0.24 -0.2 459,953 + AO353_02140 0.24 -1.0 459,953 + AO353_02140 0.24 -0.6 459,953 + AO353_02140 0.24 -1.0 459,953 + AO353_02140 0.24 -1.5 459,953 + AO353_02140 0.24 -3.0 459,953 + AO353_02140 0.24 -2.2 459,953 + AO353_02140 0.24 -1.0 459,953 + AO353_02140 0.24 -0.2 459,953 + AO353_02140 0.24 +0.1 459,953 + AO353_02140 0.24 -0.2 459,953 + AO353_02140 0.24 -1.0 459,954 - AO353_02140 0.25 -4.2 459,954 - AO353_02140 0.25 -2.0 459,954 - AO353_02140 0.25 -1.4 459,954 - AO353_02140 0.25 -0.2 459,954 - AO353_02140 0.25 -1.2 459,954 - AO353_02140 0.25 -1.6 459,954 - AO353_02140 0.25 -1.3 459,954 - AO353_02140 0.25 +0.1 459,954 - AO353_02140 0.25 -2.0 459,954 - AO353_02140 0.25 +0.1 459,954 - AO353_02140 0.25 -1.3 459,954 - AO353_02140 0.25 -2.8 459,954 - AO353_02140 0.25 -1.2 459,954 - AO353_02140 0.25 -2.0 459,957 + AO353_02140 0.26 -2.6 459,957 + AO353_02140 0.26 -0.7 459,957 + AO353_02140 0.26 -1.3 459,957 + AO353_02140 0.26 +0.1 459,957 + AO353_02140 0.26 -1.7 459,957 + AO353_02140 0.26 -0.9 459,957 + AO353_02140 0.26 -0.9 459,958 - AO353_02140 0.26 -1.5 459,958 - AO353_02140 0.26 -0.8 459,958 - AO353_02140 0.26 -2.0 459,958 - AO353_02140 0.26 -1.7 459,958 - AO353_02140 0.26 -1.4 459,958 - AO353_02140 0.26 -3.3 459,958 - AO353_02140 0.26 -2.1 460,008 - AO353_02140 0.43 -1.0 460,101 + AO353_02140 0.74 +0.7 460,101 + AO353_02140 0.74 -0.7 460,101 + AO353_02140 0.74 -2.2 460,101 + AO353_02140 0.74 -3.0 460,101 + AO353_02140 0.74 -1.2 460,102 - AO353_02140 0.74 -1.4 460,102 - AO353_02140 0.74 -0.3 460,102 - AO353_02140 0.74 -2.2 460,102 - AO353_02140 0.74 -1.0 460,102 - AO353_02140 0.74 +0.1 460,102 - AO353_02140 0.74 -1.6 460,102 - AO353_02140 0.74 -0.6 460,102 - AO353_02140 0.74 -0.5 460,161 + +0.7 460,161 + -0.0 460,161 + -0.6 460,371 + AO353_02145 0.34 -1.4 460,372 - AO353_02145 0.34 +1.2 460,372 - AO353_02145 0.34 -1.3 460,419 + AO353_02145 0.43 -0.5 460,419 + AO353_02145 0.43 -0.9 460,419 + AO353_02145 0.43 -1.2 460,420 - AO353_02145 0.43 -0.9 460,420 - AO353_02145 0.43 +0.9 460,420 - AO353_02145 0.43 +0.7 460,420 - AO353_02145 0.43 -1.3 460,494 + AO353_02145 0.57 -1.1 460,494 + AO353_02145 0.57 -0.3 460,495 - AO353_02145 0.58 -0.1 460,575 + AO353_02145 0.73 -1.4 460,575 + AO353_02145 0.73 -0.7 460,575 + AO353_02145 0.73 -2.0 460,575 + AO353_02145 0.73 -0.2 460,575 + AO353_02145 0.73 -0.9 460,575 + AO353_02145 0.73 -0.7 460,575 + AO353_02145 0.73 +0.1 460,575 + AO353_02145 0.73 -2.3 460,576 - AO353_02145 0.73 -0.5 460,576 - AO353_02145 0.73 -1.2 460,693 + -0.9 460,694 - -2.3 460,732 + +0.5 460,732 + -2.3 460,732 + -1.2 460,732 + +0.7 460,733 - +0.1 460,744 + -0.2 460,745 - -1.1 460,745 - +0.4 460,857 + +0.3 460,858 - -0.6 460,875 + -0.9 460,875 + +0.2 460,875 + +1.2 460,875 + +0.3 460,875 + +0.7 460,876 - +0.0 460,894 + -0.7 460,894 + +1.9 460,895 - -0.5 460,905 - +1.1 460,964 + -0.4 460,964 + +0.4 460,964 + -0.7 460,964 + +0.7 460,964 + +0.6 460,965 - +0.2 460,965 - +0.2 460,996 + -0.8 460,997 - +0.1 461,034 + -0.8 461,080 + AO353_02150 0.12 -0.5 461,080 + AO353_02150 0.12 -1.0 461,351 - AO353_02150 0.32 -0.9 461,371 - AO353_02150 0.33 +0.3 461,371 - AO353_02150 0.33 -0.1
Or see this region's nucleotide sequence