Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE53_001258 and ABIE53_001259 are separated by 60 nucleotides ABIE53_001259 and ABIE53_001260 are separated by 53 nucleotides ABIE53_001260 and ABIE53_001261 are separated by 297 nucleotides
ABIE53_001258: ABIE53_001258 - chromosome partitioning protein, at 1,402,614 to 1,403,252
_001258
ABIE53_001259: ABIE53_001259 - aspartate 1-decarboxylase, at 1,403,313 to 1,403,699
_001259
ABIE53_001260: ABIE53_001260 - pantoate--beta-alanine ligase, at 1,403,753 to 1,404,586
_001260
ABIE53_001261: ABIE53_001261 - segregation and condensation protein A, at 1,404,884 to 1,405,759
_001261
Position (kb) 1403
1404
1405 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1402.915 kb on + strand, within ABIE53_001258 at 1402.915 kb on + strand, within ABIE53_001258 at 1402.915 kb on + strand, within ABIE53_001258 at 1402.915 kb on + strand, within ABIE53_001258 at 1402.915 kb on + strand, within ABIE53_001258 at 1402.915 kb on + strand, within ABIE53_001258 at 1402.916 kb on - strand, within ABIE53_001258 at 1402.916 kb on - strand, within ABIE53_001258 at 1402.916 kb on - strand, within ABIE53_001258 at 1403.109 kb on + strand, within ABIE53_001258 at 1403.109 kb on + strand, within ABIE53_001258 at 1403.110 kb on - strand, within ABIE53_001258 at 1403.130 kb on + strand, within ABIE53_001258 at 1403.130 kb on + strand, within ABIE53_001258 at 1403.130 kb on + strand, within ABIE53_001258 at 1403.130 kb on + strand, within ABIE53_001258 at 1403.130 kb on + strand, within ABIE53_001258 at 1403.130 kb on + strand, within ABIE53_001258 at 1403.131 kb on - strand, within ABIE53_001258 at 1403.131 kb on - strand, within ABIE53_001258 at 1403.131 kb on - strand, within ABIE53_001258 at 1403.131 kb on - strand, within ABIE53_001258 at 1403.284 kb on + strand at 1403.285 kb on - strand at 1403.285 kb on - strand at 1403.285 kb on - strand at 1403.285 kb on - strand at 1403.330 kb on + strand at 1403.331 kb on - strand at 1403.331 kb on - strand at 1403.349 kb on - strand at 1403.527 kb on + strand, within ABIE53_001259 at 1403.588 kb on + strand, within ABIE53_001259 at 1403.704 kb on - strand at 1403.704 kb on - strand at 1403.704 kb on - strand at 1403.743 kb on + strand at 1403.744 kb on - strand at 1403.744 kb on - strand at 1403.744 kb on - strand at 1404.670 kb on - strand at 1404.670 kb on - strand at 1404.670 kb on - strand at 1404.696 kb on + strand at 1404.696 kb on + strand at 1404.697 kb on - strand at 1404.697 kb on - strand at 1404.697 kb on - strand at 1404.697 kb on - strand at 1404.697 kb on - strand at 1404.897 kb on + strand at 1404.897 kb on + strand at 1404.897 kb on + strand at 1404.898 kb on - strand at 1404.898 kb on - strand at 1404.898 kb on - strand at 1404.898 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 1,402,915 + ABIE53_001258 0.47 +0.1 1,402,915 + ABIE53_001258 0.47 -0.4 1,402,915 + ABIE53_001258 0.47 +0.8 1,402,915 + ABIE53_001258 0.47 +0.1 1,402,915 + ABIE53_001258 0.47 -1.4 1,402,915 + ABIE53_001258 0.47 -2.3 1,402,916 - ABIE53_001258 0.47 -0.9 1,402,916 - ABIE53_001258 0.47 +0.4 1,402,916 - ABIE53_001258 0.47 -0.6 1,403,109 + ABIE53_001258 0.77 +1.4 1,403,109 + ABIE53_001258 0.77 -0.4 1,403,110 - ABIE53_001258 0.78 -2.6 1,403,130 + ABIE53_001258 0.81 -2.4 1,403,130 + ABIE53_001258 0.81 -0.7 1,403,130 + ABIE53_001258 0.81 -3.1 1,403,130 + ABIE53_001258 0.81 +0.2 1,403,130 + ABIE53_001258 0.81 -0.7 1,403,130 + ABIE53_001258 0.81 -2.1 1,403,131 - ABIE53_001258 0.81 -0.8 1,403,131 - ABIE53_001258 0.81 +0.2 1,403,131 - ABIE53_001258 0.81 +0.1 1,403,131 - ABIE53_001258 0.81 +0.8 1,403,284 + -0.3 1,403,285 - -0.5 1,403,285 - +0.4 1,403,285 - -0.4 1,403,285 - -0.6 1,403,330 + +0.4 1,403,331 - -0.5 1,403,331 - +0.4 1,403,349 - +0.4 1,403,527 + ABIE53_001259 0.55 -0.4 1,403,588 + ABIE53_001259 0.71 +0.4 1,403,704 - +0.1 1,403,704 - -0.4 1,403,704 - +0.4 1,403,743 + +0.1 1,403,744 - -0.3 1,403,744 - -0.3 1,403,744 - -0.6 1,404,670 - -2.1 1,404,670 - -0.6 1,404,670 - -0.5 1,404,696 + +0.4 1,404,696 + +2.4 1,404,697 - -1.7 1,404,697 - -0.9 1,404,697 - -0.2 1,404,697 - +2.4 1,404,697 - +1.2 1,404,897 + -0.9 1,404,897 + -0.5 1,404,897 + +1.1 1,404,898 - -0.4 1,404,898 - -1.4 1,404,898 - -1.5 1,404,898 - -1.0
Or see this region's nucleotide sequence