Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2207

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_2206 and Ac3H11_2207 overlap by 4 nucleotidesAc3H11_2207 and Ac3H11_2208 are separated by 306 nucleotides Ac3H11_2206 - Chromate transport protein ChrA, at 435,118 to 436,494 _2206 Ac3H11_2207 - Chromate resistance protein ChrB, at 436,491 to 437,459 _2207 Ac3H11_2208 - Propionate--CoA ligase (EC 6.2.1.17), at 437,766 to 439,667 _2208 Position (kb) 436 437 438Strain fitness (log2 ratio) -2 -1 0 1 2at 435.614 kb on + strand, within Ac3H11_2206at 435.614 kb on + strand, within Ac3H11_2206at 435.614 kb on + strand, within Ac3H11_2206at 435.614 kb on + strand, within Ac3H11_2206at 435.615 kb on - strand, within Ac3H11_2206at 435.615 kb on - strand, within Ac3H11_2206at 435.615 kb on - strand, within Ac3H11_2206at 435.635 kb on + strand, within Ac3H11_2206at 435.635 kb on + strand, within Ac3H11_2206at 435.636 kb on - strand, within Ac3H11_2206at 435.636 kb on - strand, within Ac3H11_2206at 435.636 kb on - strand, within Ac3H11_2206at 435.641 kb on + strand, within Ac3H11_2206at 435.641 kb on + strand, within Ac3H11_2206at 435.641 kb on + strand, within Ac3H11_2206at 435.641 kb on + strand, within Ac3H11_2206at 435.641 kb on + strand, within Ac3H11_2206at 435.641 kb on + strand, within Ac3H11_2206at 435.641 kb on + strand, within Ac3H11_2206at 435.642 kb on - strand, within Ac3H11_2206at 435.642 kb on - strand, within Ac3H11_2206at 435.642 kb on - strand, within Ac3H11_2206at 435.642 kb on - strand, within Ac3H11_2206at 435.642 kb on - strand, within Ac3H11_2206at 435.642 kb on - strand, within Ac3H11_2206at 435.642 kb on - strand, within Ac3H11_2206at 435.642 kb on - strand, within Ac3H11_2206at 435.642 kb on - strand, within Ac3H11_2206at 435.656 kb on + strand, within Ac3H11_2206at 435.656 kb on + strand, within Ac3H11_2206at 435.657 kb on - strand, within Ac3H11_2206at 435.657 kb on - strand, within Ac3H11_2206at 435.932 kb on + strand, within Ac3H11_2206at 435.933 kb on - strand, within Ac3H11_2206at 435.933 kb on - strand, within Ac3H11_2206at 435.933 kb on - strand, within Ac3H11_2206at 435.933 kb on - strand, within Ac3H11_2206at 436.145 kb on + strand, within Ac3H11_2206at 436.145 kb on + strand, within Ac3H11_2206at 436.145 kb on + strand, within Ac3H11_2206at 436.145 kb on + strand, within Ac3H11_2206at 436.146 kb on - strand, within Ac3H11_2206at 436.146 kb on - strand, within Ac3H11_2206at 436.146 kb on - strand, within Ac3H11_2206at 436.146 kb on - strand, within Ac3H11_2206at 436.244 kb on + strand, within Ac3H11_2206at 436.244 kb on + strand, within Ac3H11_2206at 436.244 kb on + strand, within Ac3H11_2206at 436.244 kb on + strand, within Ac3H11_2206at 436.244 kb on + strand, within Ac3H11_2206at 436.244 kb on + strand, within Ac3H11_2206at 436.245 kb on - strand, within Ac3H11_2206at 436.245 kb on - strand, within Ac3H11_2206at 436.245 kb on - strand, within Ac3H11_2206at 436.245 kb on - strand, within Ac3H11_2206at 436.245 kb on - strand, within Ac3H11_2206at 436.245 kb on - strand, within Ac3H11_2206at 436.245 kb on - strand, within Ac3H11_2206at 436.245 kb on - strand, within Ac3H11_2206at 436.289 kb on + strand, within Ac3H11_2206at 436.289 kb on + strand, within Ac3H11_2206at 436.289 kb on + strand, within Ac3H11_2206at 436.289 kb on + strand, within Ac3H11_2206at 436.289 kb on + strand, within Ac3H11_2206at 436.290 kb on - strand, within Ac3H11_2206at 436.290 kb on - strand, within Ac3H11_2206at 436.290 kb on - strand, within Ac3H11_2206at 436.290 kb on - strand, within Ac3H11_2206at 436.290 kb on - strand, within Ac3H11_2206at 436.290 kb on - strand, within Ac3H11_2206at 436.290 kb on - strand, within Ac3H11_2206at 436.290 kb on - strand, within Ac3H11_2206at 436.290 kb on - strand, within Ac3H11_2206at 436.290 kb on - strand, within Ac3H11_2206at 436.549 kb on + strandat 436.549 kb on + strandat 436.549 kb on + strandat 436.550 kb on - strandat 436.550 kb on - strandat 436.550 kb on - strandat 436.550 kb on - strandat 436.550 kb on - strandat 436.550 kb on - strandat 436.550 kb on - strandat 436.550 kb on - strandat 436.550 kb on - strandat 436.679 kb on - strand, within Ac3H11_2207at 437.074 kb on + strand, within Ac3H11_2207at 437.075 kb on - strand, within Ac3H11_2207at 437.077 kb on + strand, within Ac3H11_2207at 437.077 kb on + strand, within Ac3H11_2207at 437.077 kb on + strand, within Ac3H11_2207at 437.350 kb on + strand, within Ac3H11_2207at 437.350 kb on + strand, within Ac3H11_2207at 437.351 kb on - strand, within Ac3H11_2207at 437.351 kb on - strand, within Ac3H11_2207at 437.468 kb on + strandat 437.470 kb on + strandat 437.517 kb on - strandat 437.554 kb on + strandat 437.554 kb on + strandat 437.555 kb on - strandat 437.555 kb on - strandat 437.619 kb on - strandat 437.784 kb on + strandat 437.784 kb on + strandat 437.784 kb on + strandat 437.784 kb on + strandat 437.784 kb on + strandat 437.784 kb on + strandat 437.785 kb on - strandat 437.785 kb on - strandat 437.785 kb on - strandat 437.785 kb on - strandat 437.785 kb on - strandat 437.785 kb on - strandat 437.886 kb on + strandat 437.887 kb on - strandat 437.887 kb on - strandat 438.027 kb on + strand, within Ac3H11_2208at 438.027 kb on + strand, within Ac3H11_2208at 438.027 kb on + strand, within Ac3H11_2208at 438.027 kb on + strand, within Ac3H11_2208at 438.027 kb on + strand, within Ac3H11_2208at 438.028 kb on - strand, within Ac3H11_2208at 438.028 kb on - strand, within Ac3H11_2208at 438.117 kb on + strand, within Ac3H11_2208at 438.117 kb on + strand, within Ac3H11_2208at 438.117 kb on + strand, within Ac3H11_2208at 438.117 kb on + strand, within Ac3H11_2208at 438.117 kb on + strand, within Ac3H11_2208at 438.117 kb on + strand, within Ac3H11_2208at 438.117 kb on + strand, within Ac3H11_2208at 438.118 kb on - strand, within Ac3H11_2208at 438.118 kb on - strand, within Ac3H11_2208at 438.118 kb on - strand, within Ac3H11_2208at 438.118 kb on - strand, within Ac3H11_2208at 438.118 kb on - strand, within Ac3H11_2208at 438.118 kb on - strand, within Ac3H11_2208at 438.118 kb on - strand, within Ac3H11_2208at 438.118 kb on - strand, within Ac3H11_2208at 438.118 kb on - strand, within Ac3H11_2208at 438.118 kb on - strand, within Ac3H11_2208at 438.118 kb on - strand, within Ac3H11_2208at 438.298 kb on - strand, within Ac3H11_2208at 438.352 kb on + strand, within Ac3H11_2208at 438.353 kb on - strand, within Ac3H11_2208

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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435,614 + Ac3H11_2206 0.36 +0.9
435,614 + Ac3H11_2206 0.36 -0.1
435,614 + Ac3H11_2206 0.36 -0.2
435,614 + Ac3H11_2206 0.36 -0.0
435,615 - Ac3H11_2206 0.36 -0.0
435,615 - Ac3H11_2206 0.36 -1.1
435,615 - Ac3H11_2206 0.36 +0.0
435,635 + Ac3H11_2206 0.38 +0.2
435,635 + Ac3H11_2206 0.38 -0.5
435,636 - Ac3H11_2206 0.38 +0.6
435,636 - Ac3H11_2206 0.38 -0.1
435,636 - Ac3H11_2206 0.38 +0.8
435,641 + Ac3H11_2206 0.38 +0.6
435,641 + Ac3H11_2206 0.38 +0.1
435,641 + Ac3H11_2206 0.38 +0.1
435,641 + Ac3H11_2206 0.38 -0.4
435,641 + Ac3H11_2206 0.38 -0.5
435,641 + Ac3H11_2206 0.38 +0.3
435,641 + Ac3H11_2206 0.38 +1.1
435,642 - Ac3H11_2206 0.38 +0.9
435,642 - Ac3H11_2206 0.38 +0.5
435,642 - Ac3H11_2206 0.38 -0.8
435,642 - Ac3H11_2206 0.38 +0.4
435,642 - Ac3H11_2206 0.38 +0.8
435,642 - Ac3H11_2206 0.38 +0.2
435,642 - Ac3H11_2206 0.38 +1.1
435,642 - Ac3H11_2206 0.38 -0.5
435,642 - Ac3H11_2206 0.38 +0.7
435,656 + Ac3H11_2206 0.39 +0.3
435,656 + Ac3H11_2206 0.39 -0.9
435,657 - Ac3H11_2206 0.39 +0.8
435,657 - Ac3H11_2206 0.39 +0.5
435,932 + Ac3H11_2206 0.59 +0.3
435,933 - Ac3H11_2206 0.59 +0.8
435,933 - Ac3H11_2206 0.59 +0.2
435,933 - Ac3H11_2206 0.59 +0.4
435,933 - Ac3H11_2206 0.59 -0.8
436,145 + Ac3H11_2206 0.75 +1.4
436,145 + Ac3H11_2206 0.75 +0.7
436,145 + Ac3H11_2206 0.75 -1.3
436,145 + Ac3H11_2206 0.75 +1.0
436,146 - Ac3H11_2206 0.75 +0.6
436,146 - Ac3H11_2206 0.75 +0.0
436,146 - Ac3H11_2206 0.75 +0.8
436,146 - Ac3H11_2206 0.75 +0.1
436,244 + Ac3H11_2206 0.82 +0.3
436,244 + Ac3H11_2206 0.82 -0.2
436,244 + Ac3H11_2206 0.82 +0.9
436,244 + Ac3H11_2206 0.82 -2.0
436,244 + Ac3H11_2206 0.82 -0.2
436,244 + Ac3H11_2206 0.82 +0.2
436,245 - Ac3H11_2206 0.82 +0.5
436,245 - Ac3H11_2206 0.82 +0.8
436,245 - Ac3H11_2206 0.82 -0.0
436,245 - Ac3H11_2206 0.82 +0.3
436,245 - Ac3H11_2206 0.82 -0.6
436,245 - Ac3H11_2206 0.82 +0.1
436,245 - Ac3H11_2206 0.82 +0.2
436,245 - Ac3H11_2206 0.82 +0.0
436,289 + Ac3H11_2206 0.85 -0.2
436,289 + Ac3H11_2206 0.85 -0.4
436,289 + Ac3H11_2206 0.85 -0.2
436,289 + Ac3H11_2206 0.85 -0.2
436,289 + Ac3H11_2206 0.85 -0.1
436,290 - Ac3H11_2206 0.85 +0.6
436,290 - Ac3H11_2206 0.85 -0.1
436,290 - Ac3H11_2206 0.85 +1.0
436,290 - Ac3H11_2206 0.85 -0.0
436,290 - Ac3H11_2206 0.85 +0.7
436,290 - Ac3H11_2206 0.85 -0.3
436,290 - Ac3H11_2206 0.85 +0.3
436,290 - Ac3H11_2206 0.85 +0.2
436,290 - Ac3H11_2206 0.85 -0.4
436,290 - Ac3H11_2206 0.85 +0.1
436,549 + -0.3
436,549 + -0.1
436,549 + -0.5
436,550 - +1.7
436,550 - +0.2
436,550 - +0.6
436,550 - -1.3
436,550 - +0.3
436,550 - +0.1
436,550 - +0.8
436,550 - +0.0
436,550 - -0.3
436,679 - Ac3H11_2207 0.19 -1.2
437,074 + Ac3H11_2207 0.60 +0.1
437,075 - Ac3H11_2207 0.60 +0.4
437,077 + Ac3H11_2207 0.60 +1.3
437,077 + Ac3H11_2207 0.60 -0.8
437,077 + Ac3H11_2207 0.60 -1.6
437,350 + Ac3H11_2207 0.89 -0.9
437,350 + Ac3H11_2207 0.89 -0.1
437,351 - Ac3H11_2207 0.89 -0.5
437,351 - Ac3H11_2207 0.89 +0.2
437,468 + -0.0
437,470 + +0.6
437,517 - -0.0
437,554 + +0.5
437,554 + +0.7
437,555 - -0.2
437,555 - +0.5
437,619 - +0.7
437,784 + +1.3
437,784 + +0.3
437,784 + -0.7
437,784 + -0.2
437,784 + +0.9
437,784 + -0.1
437,785 - +1.0
437,785 - -1.1
437,785 - +0.2
437,785 - +0.3
437,785 - +1.3
437,785 - +0.3
437,886 + +0.5
437,887 - -0.9
437,887 - +0.2
438,027 + Ac3H11_2208 0.14 -1.1
438,027 + Ac3H11_2208 0.14 +0.5
438,027 + Ac3H11_2208 0.14 +0.3
438,027 + Ac3H11_2208 0.14 +0.6
438,027 + Ac3H11_2208 0.14 +0.2
438,028 - Ac3H11_2208 0.14 +0.1
438,028 - Ac3H11_2208 0.14 +2.2
438,117 + Ac3H11_2208 0.18 +0.2
438,117 + Ac3H11_2208 0.18 -0.7
438,117 + Ac3H11_2208 0.18 +1.2
438,117 + Ac3H11_2208 0.18 +0.1
438,117 + Ac3H11_2208 0.18 +0.4
438,117 + Ac3H11_2208 0.18 +0.3
438,117 + Ac3H11_2208 0.18 +1.2
438,118 - Ac3H11_2208 0.19 +0.4
438,118 - Ac3H11_2208 0.19 +0.5
438,118 - Ac3H11_2208 0.19 +0.0
438,118 - Ac3H11_2208 0.19 +0.9
438,118 - Ac3H11_2208 0.19 +0.4
438,118 - Ac3H11_2208 0.19 -0.1
438,118 - Ac3H11_2208 0.19 -0.2
438,118 - Ac3H11_2208 0.19 -0.9
438,118 - Ac3H11_2208 0.19 +0.2
438,118 - Ac3H11_2208 0.19 -0.0
438,118 - Ac3H11_2208 0.19 -0.3
438,298 - Ac3H11_2208 0.28 +0.9
438,352 + Ac3H11_2208 0.31 +0.4
438,353 - Ac3H11_2208 0.31 -1.1

Or see this region's nucleotide sequence