Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS33655 and AZOBR_RS33660 are separated by 13 nucleotides AZOBR_RS33660 and AZOBR_RS33665 are separated by 82 nucleotides
AZOBR_RS33655: AZOBR_RS33655 - uridine kinase, at 80,809 to 81,621
_RS33655
AZOBR_RS33660: AZOBR_RS33660 - molybdenum storage protein subunit alpha, at 81,635 to 82,495
_RS33660
AZOBR_RS33665: AZOBR_RS33665 - exported protein of unknown function, at 82,578 to 82,877
_RS33665
Position (kb) 80
81
82 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 80.301 kb on + strand at 80.302 kb on - strand at 80.424 kb on + strand at 80.424 kb on + strand at 80.424 kb on + strand at 80.425 kb on - strand at 80.425 kb on - strand at 80.435 kb on + strand at 80.435 kb on + strand at 80.436 kb on + strand at 80.671 kb on - strand at 81.064 kb on + strand, within AZOBR_RS33655 at 81.064 kb on + strand, within AZOBR_RS33655 at 81.064 kb on + strand, within AZOBR_RS33655 at 81.230 kb on + strand, within AZOBR_RS33655 at 81.262 kb on + strand, within AZOBR_RS33655 at 81.263 kb on - strand, within AZOBR_RS33655 at 81.368 kb on - strand, within AZOBR_RS33655 at 81.368 kb on - strand at 81.368 kb on - strand, within AZOBR_RS33655 at 81.392 kb on - strand, within AZOBR_RS33655 at 81.914 kb on + strand, within AZOBR_RS33660 at 81.915 kb on - strand, within AZOBR_RS33660 at 81.915 kb on - strand, within AZOBR_RS33660 at 82.031 kb on + strand, within AZOBR_RS33660 at 82.032 kb on - strand, within AZOBR_RS33660 at 82.032 kb on - strand, within AZOBR_RS33660 at 82.115 kb on + strand, within AZOBR_RS33660 at 82.239 kb on - strand, within AZOBR_RS33660 at 82.239 kb on - strand, within AZOBR_RS33660
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 80,301 + +0.1 80,302 - -2.7 80,424 + +0.3 80,424 + -0.9 80,424 + -1.6 80,425 - -1.0 80,425 - -0.2 80,435 + -0.9 80,435 + -0.2 80,436 + -3.2 80,671 - -3.3 81,064 + AZOBR_RS33655 0.31 +1.1 81,064 + AZOBR_RS33655 0.31 -0.1 81,064 + AZOBR_RS33655 0.31 +0.2 81,230 + AZOBR_RS33655 0.52 +2.1 81,262 + AZOBR_RS33655 0.56 +0.0 81,263 - AZOBR_RS33655 0.56 +0.9 81,368 - AZOBR_RS33655 0.69 -2.4 81,368 - +1.4 81,368 - AZOBR_RS33655 0.69 +1.6 81,392 - AZOBR_RS33655 0.72 +0.3 81,914 + AZOBR_RS33660 0.32 -3.5 81,915 - AZOBR_RS33660 0.33 +0.6 81,915 - AZOBR_RS33660 0.33 +1.0 82,031 + AZOBR_RS33660 0.46 +0.9 82,032 - AZOBR_RS33660 0.46 -0.0 82,032 - AZOBR_RS33660 0.46 +0.7 82,115 + AZOBR_RS33660 0.56 +1.0 82,239 - AZOBR_RS33660 0.70 +1.0 82,239 - AZOBR_RS33660 0.70 +0.7
Or see this region's nucleotide sequence