Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31850 and AZOBR_RS31855 are separated by 42 nucleotides AZOBR_RS31855 and AZOBR_RS31860 are separated by 315 nucleotides
AZOBR_RS31850: AZOBR_RS31850 - hypothetical protein, at 510,348 to 510,653
_RS31850
AZOBR_RS31855: AZOBR_RS31855 - hypothetical protein, at 510,696 to 510,968
_RS31855
AZOBR_RS31860: AZOBR_RS31860 - hypothetical protein, at 511,284 to 512,546
_RS31860
Position (kb) 511
512
513 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 510.438 kb on + strand, within AZOBR_RS31850 at 510.770 kb on - strand, within AZOBR_RS31855 at 510.793 kb on + strand, within AZOBR_RS31855 at 510.794 kb on - strand, within AZOBR_RS31855 at 510.794 kb on - strand, within AZOBR_RS31855 at 510.794 kb on - strand, within AZOBR_RS31855 at 510.794 kb on - strand, within AZOBR_RS31855 at 510.796 kb on + strand, within AZOBR_RS31855 at 510.797 kb on - strand, within AZOBR_RS31855 at 510.797 kb on - strand, within AZOBR_RS31855 at 510.845 kb on - strand, within AZOBR_RS31855 at 511.071 kb on + strand at 511.072 kb on - strand at 511.226 kb on - strand at 511.359 kb on + strand at 511.359 kb on + strand at 511.468 kb on - strand, within AZOBR_RS31860 at 511.515 kb on + strand, within AZOBR_RS31860 at 511.962 kb on + strand, within AZOBR_RS31860 at 511.963 kb on - strand, within AZOBR_RS31860 at 512.079 kb on + strand, within AZOBR_RS31860 at 512.079 kb on + strand, within AZOBR_RS31860 at 512.145 kb on + strand, within AZOBR_RS31860 at 512.146 kb on - strand, within AZOBR_RS31860 at 512.196 kb on + strand, within AZOBR_RS31860 at 512.197 kb on - strand, within AZOBR_RS31860 at 512.241 kb on + strand, within AZOBR_RS31860 at 512.241 kb on + strand, within AZOBR_RS31860 at 512.241 kb on + strand, within AZOBR_RS31860 at 512.242 kb on - strand, within AZOBR_RS31860 at 512.242 kb on - strand, within AZOBR_RS31860 at 512.242 kb on - strand, within AZOBR_RS31860 at 512.242 kb on - strand, within AZOBR_RS31860 at 512.479 kb on - strand at 512.479 kb on - strand at 512.738 kb on + strand at 512.738 kb on + strand at 512.739 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 510,438 + AZOBR_RS31850 0.29 -0.0 510,770 - AZOBR_RS31855 0.27 -0.8 510,793 + AZOBR_RS31855 0.36 -0.8 510,794 - AZOBR_RS31855 0.36 +0.1 510,794 - AZOBR_RS31855 0.36 -0.8 510,794 - AZOBR_RS31855 0.36 -2.0 510,794 - AZOBR_RS31855 0.36 -1.0 510,796 + AZOBR_RS31855 0.37 -0.4 510,797 - AZOBR_RS31855 0.37 +0.5 510,797 - AZOBR_RS31855 0.37 +0.7 510,845 - AZOBR_RS31855 0.55 -0.9 511,071 + -4.6 511,072 - +0.5 511,226 - +0.1 511,359 + +1.9 511,359 + +0.6 511,468 - AZOBR_RS31860 0.15 +0.6 511,515 + AZOBR_RS31860 0.18 -2.6 511,962 + AZOBR_RS31860 0.54 +0.2 511,963 - AZOBR_RS31860 0.54 +2.0 512,079 + AZOBR_RS31860 0.63 +1.3 512,079 + AZOBR_RS31860 0.63 +1.6 512,145 + AZOBR_RS31860 0.68 -1.1 512,146 - AZOBR_RS31860 0.68 +0.2 512,196 + AZOBR_RS31860 0.72 +2.0 512,197 - AZOBR_RS31860 0.72 +0.3 512,241 + AZOBR_RS31860 0.76 -1.2 512,241 + AZOBR_RS31860 0.76 +2.0 512,241 + AZOBR_RS31860 0.76 +0.8 512,242 - AZOBR_RS31860 0.76 -1.3 512,242 - AZOBR_RS31860 0.76 +2.0 512,242 - AZOBR_RS31860 0.76 -0.2 512,242 - AZOBR_RS31860 0.76 -0.1 512,479 - -2.2 512,479 - +1.1 512,738 + -0.1 512,738 + +0.7 512,739 - -2.8
Or see this region's nucleotide sequence