Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31700 and AZOBR_RS31705 are separated by 32 nucleotides
AZOBR_RS31700: AZOBR_RS31700 - gamma-glutamyltransferase, at 480,068 to 481,651
_RS31700
AZOBR_RS31705: AZOBR_RS31705 - hypothetical protein, at 481,684 to 481,941
_RS31705
Position (kb) 480
481
482 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 479.105 kb on + strand at 479.654 kb on + strand at 479.654 kb on + strand at 479.711 kb on + strand at 479.711 kb on + strand at 479.712 kb on - strand at 479.712 kb on - strand at 479.712 kb on - strand at 479.775 kb on - strand at 480.756 kb on + strand, within AZOBR_RS31700 at 480.756 kb on + strand, within AZOBR_RS31700 at 480.897 kb on + strand, within AZOBR_RS31700 at 480.931 kb on - strand, within AZOBR_RS31700 at 480.931 kb on - strand, within AZOBR_RS31700 at 480.931 kb on - strand, within AZOBR_RS31700 at 480.931 kb on - strand, within AZOBR_RS31700 at 480.931 kb on - strand, within AZOBR_RS31700 at 481.030 kb on - strand, within AZOBR_RS31700 at 481.030 kb on - strand, within AZOBR_RS31700 at 481.030 kb on - strand, within AZOBR_RS31700 at 481.030 kb on - strand, within AZOBR_RS31700 at 481.030 kb on - strand, within AZOBR_RS31700 at 481.446 kb on + strand, within AZOBR_RS31700 at 481.446 kb on + strand at 481.446 kb on + strand, within AZOBR_RS31700 at 481.446 kb on + strand, within AZOBR_RS31700 at 481.447 kb on - strand, within AZOBR_RS31700 at 481.778 kb on + strand, within AZOBR_RS31705 at 481.779 kb on - strand, within AZOBR_RS31705 at 481.925 kb on + strand at 481.925 kb on + strand at 481.983 kb on + strand at 481.984 kb on - strand at 482.011 kb on + strand at 482.049 kb on - strand at 482.081 kb on + strand at 482.081 kb on + strand at 482.081 kb on + strand at 482.081 kb on + strand at 482.082 kb on - strand at 482.098 kb on + strand at 482.098 kb on + strand at 482.098 kb on + strand at 482.098 kb on + strand at 482.099 kb on - strand at 482.099 kb on - strand at 482.099 kb on - strand at 482.099 kb on - strand at 482.099 kb on - strand at 482.351 kb on - strand at 482.351 kb on - strand at 482.581 kb on + strand at 482.581 kb on + strand at 482.582 kb on - strand at 482.582 kb on - strand at 482.582 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 479,105 + +0.1 479,654 + -2.1 479,654 + +0.4 479,711 + -0.8 479,711 + +0.8 479,712 - +0.6 479,712 - +1.6 479,712 - -1.2 479,775 - -1.9 480,756 + AZOBR_RS31700 0.43 -3.1 480,756 + AZOBR_RS31700 0.43 +1.0 480,897 + AZOBR_RS31700 0.52 +0.3 480,931 - AZOBR_RS31700 0.54 +2.0 480,931 - AZOBR_RS31700 0.54 +3.5 480,931 - AZOBR_RS31700 0.54 +3.1 480,931 - AZOBR_RS31700 0.54 +1.0 480,931 - AZOBR_RS31700 0.54 +0.8 481,030 - AZOBR_RS31700 0.61 +1.2 481,030 - AZOBR_RS31700 0.61 +1.8 481,030 - AZOBR_RS31700 0.61 +1.1 481,030 - AZOBR_RS31700 0.61 -0.3 481,030 - AZOBR_RS31700 0.61 +1.2 481,446 + AZOBR_RS31700 0.87 -0.2 481,446 + -1.7 481,446 + AZOBR_RS31700 0.87 +0.6 481,446 + AZOBR_RS31700 0.87 +0.4 481,447 - AZOBR_RS31700 0.87 +0.3 481,778 + AZOBR_RS31705 0.36 -4.1 481,779 - AZOBR_RS31705 0.37 +0.2 481,925 + +0.3 481,925 + -3.0 481,983 + +0.3 481,984 - +1.0 482,011 + -0.0 482,049 - -0.7 482,081 + -1.2 482,081 + +0.3 482,081 + +0.8 482,081 + -0.5 482,082 - -0.2 482,098 + -0.4 482,098 + -0.4 482,098 + -0.5 482,098 + -0.3 482,099 - +2.4 482,099 - +0.7 482,099 - -0.0 482,099 - -0.2 482,099 - +0.5 482,351 - -0.8 482,351 - +0.1 482,581 + +0.3 482,581 + -1.5 482,582 - +0.1 482,582 - +0.9 482,582 - +0.1
Or see this region's nucleotide sequence