Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31385 and AZOBR_RS31390 are separated by 47 nucleotides AZOBR_RS31390 and AZOBR_RS31395 are separated by 48 nucleotides AZOBR_RS31395 and AZOBR_RS31400 are separated by 132 nucleotides
AZOBR_RS31385: AZOBR_RS31385 - GntR family transcriptional regulator, at 410,462 to 411,118
_RS31385
AZOBR_RS31390: AZOBR_RS31390 - 3-ketoacyl-ACP reductase, at 411,166 to 411,924
_RS31390
AZOBR_RS31395: AZOBR_RS31395 - cupin, at 411,973 to 412,308
_RS31395
AZOBR_RS31400: AZOBR_RS31400 - C4-dicarboxylate ABC transporter, at 412,441 to 413,430
_RS31400
Position (kb) 411
412 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 410.174 kb on - strand at 410.490 kb on - strand at 410.490 kb on - strand at 411.634 kb on + strand, within AZOBR_RS31390 at 411.730 kb on + strand, within AZOBR_RS31390 at 411.958 kb on - strand at 412.210 kb on + strand, within AZOBR_RS31395 at 412.210 kb on + strand, within AZOBR_RS31395 at 412.210 kb on + strand, within AZOBR_RS31395 at 412.211 kb on - strand, within AZOBR_RS31395 at 412.211 kb on - strand, within AZOBR_RS31395 at 412.211 kb on - strand, within AZOBR_RS31395 at 412.417 kb on + strand at 412.418 kb on - strand at 412.418 kb on - strand at 412.440 kb on + strand at 412.440 kb on + strand at 412.441 kb on - strand at 412.441 kb on - strand at 412.441 kb on - strand at 412.441 kb on - strand at 412.441 kb on - strand at 412.561 kb on + strand, within AZOBR_RS31400 at 412.585 kb on + strand, within AZOBR_RS31400 at 412.585 kb on + strand, within AZOBR_RS31400 at 412.586 kb on - strand, within AZOBR_RS31400 at 412.586 kb on - strand, within AZOBR_RS31400 at 412.639 kb on + strand, within AZOBR_RS31400 at 412.876 kb on + strand, within AZOBR_RS31400 at 412.876 kb on + strand, within AZOBR_RS31400 at 412.877 kb on - strand, within AZOBR_RS31400 at 412.900 kb on + strand, within AZOBR_RS31400 at 412.901 kb on - strand, within AZOBR_RS31400 at 412.901 kb on - strand, within AZOBR_RS31400 at 412.901 kb on - strand, within AZOBR_RS31400 at 412.918 kb on + strand, within AZOBR_RS31400 at 412.919 kb on - strand, within AZOBR_RS31400
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 410,174 - +0.1 410,490 - +0.9 410,490 - +1.0 411,634 + AZOBR_RS31390 0.62 -1.9 411,730 + AZOBR_RS31390 0.74 +1.2 411,958 - +0.4 412,210 + AZOBR_RS31395 0.71 -2.6 412,210 + AZOBR_RS31395 0.71 +0.2 412,210 + AZOBR_RS31395 0.71 -1.0 412,211 - AZOBR_RS31395 0.71 -0.3 412,211 - AZOBR_RS31395 0.71 +0.2 412,211 - AZOBR_RS31395 0.71 -1.9 412,417 + +0.0 412,418 - -0.5 412,418 - +0.6 412,440 + +0.5 412,440 + -3.4 412,441 - -2.7 412,441 - +1.2 412,441 - -3.5 412,441 - +0.0 412,441 - +0.2 412,561 + AZOBR_RS31400 0.12 +0.7 412,585 + AZOBR_RS31400 0.15 +0.6 412,585 + AZOBR_RS31400 0.15 -0.5 412,586 - AZOBR_RS31400 0.15 +0.3 412,586 - AZOBR_RS31400 0.15 -0.1 412,639 + AZOBR_RS31400 0.20 +0.7 412,876 + AZOBR_RS31400 0.44 -2.2 412,876 + AZOBR_RS31400 0.44 +0.7 412,877 - AZOBR_RS31400 0.44 -1.7 412,900 + AZOBR_RS31400 0.46 -1.7 412,901 - AZOBR_RS31400 0.46 +0.3 412,901 - AZOBR_RS31400 0.46 -0.5 412,901 - AZOBR_RS31400 0.46 -2.7 412,918 + AZOBR_RS31400 0.48 -2.9 412,919 - AZOBR_RS31400 0.48 +0.5
Or see this region's nucleotide sequence