Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31375 and AZOBR_RS31380 are separated by 21 nucleotides
AZOBR_RS31375: AZOBR_RS31375 - dioxygenase, at 406,333 to 407,814
_RS31375
AZOBR_RS31380: AZOBR_RS31380 - transcriptional regulator, at 407,836 to 408,531
_RS31380
Position (kb) 407
408
409 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 406.905 kb on - strand, within AZOBR_RS31375 at 406.955 kb on + strand, within AZOBR_RS31375 at 406.956 kb on - strand, within AZOBR_RS31375 at 407.420 kb on + strand, within AZOBR_RS31375 at 407.574 kb on + strand, within AZOBR_RS31375 at 407.574 kb on + strand, within AZOBR_RS31375 at 407.574 kb on + strand, within AZOBR_RS31375 at 407.574 kb on + strand, within AZOBR_RS31375 at 407.575 kb on - strand, within AZOBR_RS31375 at 407.575 kb on - strand, within AZOBR_RS31375 at 407.575 kb on - strand, within AZOBR_RS31375 at 407.575 kb on - strand, within AZOBR_RS31375 at 407.576 kb on + strand, within AZOBR_RS31375 at 407.576 kb on + strand, within AZOBR_RS31375 at 407.576 kb on + strand, within AZOBR_RS31375 at 407.577 kb on - strand, within AZOBR_RS31375 at 407.681 kb on + strand at 407.681 kb on + strand at 407.682 kb on - strand at 407.756 kb on + strand at 407.756 kb on + strand at 407.756 kb on + strand at 407.828 kb on + strand at 407.829 kb on - strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.838 kb on - strand at 407.838 kb on - strand at 407.838 kb on - strand at 407.838 kb on - strand at 408.467 kb on + strand at 408.468 kb on - strand at 408.555 kb on + strand at 408.558 kb on + strand at 408.558 kb on + strand at 408.559 kb on - strand at 408.725 kb on + strand at 408.728 kb on + strand at 408.729 kb on - strand at 408.791 kb on - strand at 408.814 kb on + strand at 408.815 kb on - strand at 408.823 kb on + strand at 408.824 kb on - strand at 408.824 kb on - strand at 408.824 kb on - strand at 408.924 kb on - strand at 408.924 kb on - strand at 408.930 kb on - strand at 408.930 kb on - strand at 409.075 kb on + strand at 409.075 kb on + strand at 409.076 kb on - strand at 409.143 kb on - strand at 409.341 kb on - strand at 409.343 kb on + strand at 409.350 kb on - strand at 409.351 kb on + strand at 409.508 kb on + strand at 409.509 kb on - strand at 409.509 kb on - strand at 409.509 kb on - strand at 409.514 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 406,905 - AZOBR_RS31375 0.39 -3.3 406,955 + AZOBR_RS31375 0.42 -2.2 406,956 - AZOBR_RS31375 0.42 -0.3 407,420 + AZOBR_RS31375 0.73 -4.5 407,574 + AZOBR_RS31375 0.84 +0.1 407,574 + AZOBR_RS31375 0.84 -1.1 407,574 + AZOBR_RS31375 0.84 -3.4 407,574 + AZOBR_RS31375 0.84 -1.4 407,575 - AZOBR_RS31375 0.84 -0.9 407,575 - AZOBR_RS31375 0.84 +1.1 407,575 - AZOBR_RS31375 0.84 -0.1 407,575 - AZOBR_RS31375 0.84 -2.2 407,576 + AZOBR_RS31375 0.84 -0.1 407,576 + AZOBR_RS31375 0.84 -1.1 407,576 + AZOBR_RS31375 0.84 +0.4 407,577 - AZOBR_RS31375 0.84 +1.3 407,681 + -1.4 407,681 + -4.3 407,682 - -0.7 407,756 + -0.0 407,756 + +0.1 407,756 + +0.3 407,828 + +0.6 407,829 - +0.1 407,837 + -0.4 407,837 + +1.4 407,837 + +0.7 407,837 + +0.5 407,837 + -3.8 407,837 + +0.3 407,837 + +1.1 407,838 - +1.2 407,838 - +0.6 407,838 - -0.0 407,838 - -0.3 408,467 + +0.7 408,468 - -1.3 408,555 + +0.4 408,558 + -1.0 408,558 + -1.6 408,559 - +0.8 408,725 + +0.1 408,728 + -2.0 408,729 - -0.3 408,791 - -0.8 408,814 + +0.0 408,815 - +0.9 408,823 + +0.5 408,824 - +0.3 408,824 - +0.4 408,824 - -3.0 408,924 - +1.6 408,924 - -0.8 408,930 - +0.0 408,930 - +0.8 409,075 + -0.5 409,075 + +1.0 409,076 - -1.0 409,143 - +0.8 409,341 - +0.2 409,343 + +0.7 409,350 - -0.6 409,351 + +1.3 409,508 + -1.7 409,509 - +0.7 409,509 - -1.1 409,509 - -3.2 409,514 - -0.3
Or see this region's nucleotide sequence