Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31060 and AZOBR_RS31065 are separated by 279 nucleotides AZOBR_RS31065 and AZOBR_RS31070 overlap by 4 nucleotides AZOBR_RS31070 and AZOBR_RS31075 are separated by 73 nucleotides
AZOBR_RS31060: AZOBR_RS31060 - isochorismatase hydrolase, at 334,958 to 335,710
_RS31060
AZOBR_RS31065: AZOBR_RS31065 - hypothetical protein, at 335,990 to 336,550
_RS31065
AZOBR_RS31070: AZOBR_RS31070 - hypothetical protein, at 336,547 to 337,155
_RS31070
AZOBR_RS31075: AZOBR_RS31075 - UTP--glucose-1-phosphate uridylyltransferase, at 337,229 to 338,098
_RS31075
Position (kb) 335
336
337 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 335.004 kb on + strand at 335.004 kb on + strand at 335.004 kb on + strand at 335.004 kb on + strand at 335.004 kb on + strand at 335.004 kb on + strand at 335.005 kb on - strand at 335.005 kb on - strand at 335.005 kb on - strand at 335.005 kb on - strand at 335.005 kb on - strand at 335.091 kb on + strand, within AZOBR_RS31060 at 335.091 kb on + strand, within AZOBR_RS31060 at 335.092 kb on - strand, within AZOBR_RS31060 at 335.092 kb on - strand, within AZOBR_RS31060 at 335.112 kb on + strand, within AZOBR_RS31060 at 335.634 kb on + strand, within AZOBR_RS31060 at 335.876 kb on + strand at 335.876 kb on + strand at 335.876 kb on + strand at 335.876 kb on + strand at 335.877 kb on - strand at 335.877 kb on - strand at 335.877 kb on - strand at 335.947 kb on + strand at 335.948 kb on - strand at 335.979 kb on - strand at 335.979 kb on - strand at 336.398 kb on + strand, within AZOBR_RS31065 at 336.399 kb on - strand, within AZOBR_RS31065 at 336.565 kb on + strand at 336.565 kb on + strand at 336.566 kb on - strand at 336.710 kb on - strand, within AZOBR_RS31070 at 336.710 kb on - strand, within AZOBR_RS31070 at 336.827 kb on - strand, within AZOBR_RS31070 at 337.237 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 335,004 + -1.1 335,004 + -0.8 335,004 + +0.4 335,004 + +0.7 335,004 + +0.7 335,004 + -1.6 335,005 - +0.1 335,005 - +0.4 335,005 - +1.4 335,005 - +0.5 335,005 - -1.5 335,091 + AZOBR_RS31060 0.18 -2.7 335,091 + AZOBR_RS31060 0.18 +0.3 335,092 - AZOBR_RS31060 0.18 -1.2 335,092 - AZOBR_RS31060 0.18 +1.9 335,112 + AZOBR_RS31060 0.20 +0.8 335,634 + AZOBR_RS31060 0.90 +0.4 335,876 + -3.9 335,876 + +0.1 335,876 + +0.3 335,876 + +0.5 335,877 - +0.7 335,877 - +0.6 335,877 - +0.2 335,947 + -3.0 335,948 - +0.2 335,979 - -0.2 335,979 - -0.0 336,398 + AZOBR_RS31065 0.73 -3.3 336,399 - AZOBR_RS31065 0.73 -1.9 336,565 + +0.1 336,565 + -0.5 336,566 - -0.8 336,710 - AZOBR_RS31070 0.27 -0.9 336,710 - AZOBR_RS31070 0.27 -0.2 336,827 - AZOBR_RS31070 0.46 -0.3 337,237 - -1.7
Or see this region's nucleotide sequence