Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30750 and AZOBR_RS30755 are separated by 244 nucleotides AZOBR_RS30755 and AZOBR_RS30760 are separated by 61 nucleotides
AZOBR_RS30750: AZOBR_RS30750 - cytochrome C oxidase subunit I, at 259,921 to 260,784
_RS30750
AZOBR_RS30755: AZOBR_RS30755 - acylphosphatase, at 261,029 to 261,322
_RS30755
AZOBR_RS30760: AZOBR_RS30760 - purine permease, at 261,384 to 262,745
_RS30760
Position (kb) 261
262 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 260.291 kb on + strand, within AZOBR_RS30750 at 260.291 kb on + strand, within AZOBR_RS30750 at 260.291 kb on + strand, within AZOBR_RS30750 at 260.291 kb on + strand, within AZOBR_RS30750 at 260.291 kb on + strand, within AZOBR_RS30750 at 260.291 kb on + strand, within AZOBR_RS30750 at 260.292 kb on - strand, within AZOBR_RS30750 at 260.292 kb on - strand, within AZOBR_RS30750 at 260.292 kb on - strand, within AZOBR_RS30750 at 260.445 kb on - strand, within AZOBR_RS30750 at 260.561 kb on + strand, within AZOBR_RS30750 at 260.904 kb on - strand at 260.990 kb on + strand at 260.990 kb on + strand at 260.990 kb on + strand at 260.991 kb on - strand at 260.991 kb on - strand at 260.991 kb on - strand at 261.004 kb on + strand at 261.005 kb on - strand at 261.592 kb on + strand, within AZOBR_RS30760 at 261.592 kb on + strand, within AZOBR_RS30760 at 261.593 kb on - strand, within AZOBR_RS30760 at 261.593 kb on - strand, within AZOBR_RS30760 at 261.593 kb on - strand, within AZOBR_RS30760 at 261.617 kb on - strand, within AZOBR_RS30760 at 261.694 kb on + strand, within AZOBR_RS30760 at 261.694 kb on + strand, within AZOBR_RS30760 at 261.694 kb on + strand, within AZOBR_RS30760 at 261.694 kb on + strand, within AZOBR_RS30760 at 261.694 kb on + strand, within AZOBR_RS30760 at 261.694 kb on + strand, within AZOBR_RS30760 at 261.694 kb on + strand, within AZOBR_RS30760 at 261.694 kb on + strand, within AZOBR_RS30760 at 261.694 kb on + strand, within AZOBR_RS30760 at 261.695 kb on - strand, within AZOBR_RS30760 at 261.695 kb on - strand, within AZOBR_RS30760 at 261.695 kb on - strand, within AZOBR_RS30760 at 261.695 kb on - strand, within AZOBR_RS30760 at 261.835 kb on + strand, within AZOBR_RS30760 at 261.835 kb on + strand, within AZOBR_RS30760 at 261.835 kb on + strand, within AZOBR_RS30760 at 261.836 kb on - strand, within AZOBR_RS30760 at 262.045 kb on + strand, within AZOBR_RS30760 at 262.045 kb on + strand, within AZOBR_RS30760 at 262.046 kb on - strand, within AZOBR_RS30760 at 262.171 kb on + strand, within AZOBR_RS30760 at 262.172 kb on - strand, within AZOBR_RS30760 at 262.172 kb on - strand, within AZOBR_RS30760
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 260,291 + AZOBR_RS30750 0.43 +1.0 260,291 + AZOBR_RS30750 0.43 +1.2 260,291 + AZOBR_RS30750 0.43 -0.1 260,291 + AZOBR_RS30750 0.43 +1.8 260,291 + AZOBR_RS30750 0.43 +0.4 260,291 + AZOBR_RS30750 0.43 -3.1 260,292 - AZOBR_RS30750 0.43 -2.2 260,292 - AZOBR_RS30750 0.43 -2.3 260,292 - AZOBR_RS30750 0.43 +2.2 260,445 - AZOBR_RS30750 0.61 -0.5 260,561 + AZOBR_RS30750 0.74 +0.6 260,904 - -0.9 260,990 + +1.7 260,990 + +1.6 260,990 + -0.9 260,991 - +0.5 260,991 - -1.8 260,991 - -1.4 261,004 + +1.2 261,005 - +0.2 261,592 + AZOBR_RS30760 0.15 -0.2 261,592 + AZOBR_RS30760 0.15 -0.3 261,593 - AZOBR_RS30760 0.15 +0.5 261,593 - AZOBR_RS30760 0.15 +1.0 261,593 - AZOBR_RS30760 0.15 -1.1 261,617 - AZOBR_RS30760 0.17 +0.4 261,694 + AZOBR_RS30760 0.23 -4.7 261,694 + AZOBR_RS30760 0.23 -0.3 261,694 + AZOBR_RS30760 0.23 -1.3 261,694 + AZOBR_RS30760 0.23 +0.6 261,694 + AZOBR_RS30760 0.23 +2.1 261,694 + AZOBR_RS30760 0.23 -0.1 261,694 + AZOBR_RS30760 0.23 -4.5 261,694 + AZOBR_RS30760 0.23 +2.3 261,694 + AZOBR_RS30760 0.23 -1.5 261,695 - AZOBR_RS30760 0.23 -1.3 261,695 - AZOBR_RS30760 0.23 -0.5 261,695 - AZOBR_RS30760 0.23 +0.9 261,695 - AZOBR_RS30760 0.23 -1.4 261,835 + AZOBR_RS30760 0.33 -0.4 261,835 + AZOBR_RS30760 0.33 +1.4 261,835 + AZOBR_RS30760 0.33 -5.4 261,836 - AZOBR_RS30760 0.33 -2.0 262,045 + AZOBR_RS30760 0.49 -0.0 262,045 + AZOBR_RS30760 0.49 +0.6 262,046 - AZOBR_RS30760 0.49 +0.2 262,171 + AZOBR_RS30760 0.58 +1.8 262,172 - AZOBR_RS30760 0.58 +1.5 262,172 - AZOBR_RS30760 0.58 +0.9
Or see this region's nucleotide sequence