Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30545 and AZOBR_RS30550 are separated by 34 nucleotides AZOBR_RS30550 and AZOBR_RS30555 are separated by 316 nucleotides
AZOBR_RS30545: AZOBR_RS30545 - putative DNA-binding response regulator in two-component system with YedV, at 202,968 to 203,543
_RS30545
AZOBR_RS30550: AZOBR_RS30550 - hypothetical protein, at 203,578 to 203,982
_RS30550
AZOBR_RS30555: AZOBR_RS30555 - hypothetical protein, at 204,299 to 205,441
_RS30555
Position (kb) 202
203
204 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 202.282 kb on + strand at 202.333 kb on + strand at 202.333 kb on + strand at 202.334 kb on - strand at 202.334 kb on - strand at 202.492 kb on + strand at 202.493 kb on - strand at 202.585 kb on - strand at 202.587 kb on - strand at 202.754 kb on - strand at 203.109 kb on + strand, within AZOBR_RS30545 at 203.109 kb on + strand, within AZOBR_RS30545 at 203.109 kb on + strand, within AZOBR_RS30545 at 203.110 kb on - strand, within AZOBR_RS30545 at 203.110 kb on - strand, within AZOBR_RS30545 at 203.110 kb on - strand, within AZOBR_RS30545 at 203.592 kb on + strand at 203.737 kb on + strand, within AZOBR_RS30550 at 203.738 kb on - strand, within AZOBR_RS30550 at 203.738 kb on - strand, within AZOBR_RS30550 at 203.738 kb on - strand, within AZOBR_RS30550 at 203.738 kb on - strand, within AZOBR_RS30550 at 204.270 kb on - strand at 204.270 kb on - strand at 204.428 kb on + strand, within AZOBR_RS30555 at 204.533 kb on + strand, within AZOBR_RS30555 at 204.533 kb on + strand, within AZOBR_RS30555 at 204.533 kb on + strand, within AZOBR_RS30555 at 204.533 kb on + strand, within AZOBR_RS30555 at 204.534 kb on - strand, within AZOBR_RS30555
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 202,282 + +0.2 202,333 + +2.2 202,333 + +0.3 202,334 - -2.7 202,334 - -0.6 202,492 + +0.5 202,493 - -1.4 202,585 - +0.1 202,587 - -0.3 202,754 - -0.7 203,109 + AZOBR_RS30545 0.24 +0.5 203,109 + AZOBR_RS30545 0.24 -0.6 203,109 + AZOBR_RS30545 0.24 -2.5 203,110 - AZOBR_RS30545 0.25 -2.8 203,110 - AZOBR_RS30545 0.25 -0.5 203,110 - AZOBR_RS30545 0.25 +0.2 203,592 + -0.2 203,737 + AZOBR_RS30550 0.39 -0.6 203,738 - AZOBR_RS30550 0.40 +0.7 203,738 - AZOBR_RS30550 0.40 -0.3 203,738 - AZOBR_RS30550 0.40 +1.0 203,738 - AZOBR_RS30550 0.40 +0.4 204,270 - -0.1 204,270 - -0.9 204,428 + AZOBR_RS30555 0.11 +0.6 204,533 + AZOBR_RS30555 0.20 -0.0 204,533 + AZOBR_RS30555 0.20 +1.7 204,533 + AZOBR_RS30555 0.20 +0.0 204,533 + AZOBR_RS30555 0.20 -0.0 204,534 - AZOBR_RS30555 0.21 +0.3
Or see this region's nucleotide sequence