Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29595 and AZOBR_RS29600 are separated by 520 nucleotides AZOBR_RS29600 and AZOBR_RS29605 are separated by 893 nucleotides
AZOBR_RS29595: AZOBR_RS29595 - hypothetical protein, at 769,610 to 770,242
_RS29595
AZOBR_RS29600: AZOBR_RS29600 - hypothetical protein, at 770,763 to 771,053
_RS29600
AZOBR_RS29605: AZOBR_RS29605 - transposase, at 771,947 to 772,924
_RS29605
Position (kb) 770
771
772 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 769.879 kb on + strand, within AZOBR_RS29595 at 769.879 kb on + strand, within AZOBR_RS29595 at 769.880 kb on - strand, within AZOBR_RS29595 at 769.891 kb on + strand, within AZOBR_RS29595 at 769.892 kb on - strand, within AZOBR_RS29595 at 770.225 kb on + strand at 770.285 kb on + strand at 770.379 kb on + strand at 770.380 kb on - strand at 770.380 kb on - strand at 770.380 kb on - strand at 770.651 kb on + strand at 770.651 kb on + strand at 770.664 kb on + strand at 770.665 kb on - strand at 770.665 kb on - strand at 770.702 kb on + strand at 770.914 kb on + strand, within AZOBR_RS29600 at 770.915 kb on - strand, within AZOBR_RS29600 at 770.926 kb on + strand, within AZOBR_RS29600 at 770.926 kb on + strand, within AZOBR_RS29600 at 770.927 kb on - strand, within AZOBR_RS29600 at 771.051 kb on + strand at 771.051 kb on + strand at 771.052 kb on - strand at 771.052 kb on - strand at 771.060 kb on - strand at 771.248 kb on + strand at 771.248 kb on + strand at 771.300 kb on - strand at 771.512 kb on + strand at 771.512 kb on + strand at 771.512 kb on + strand at 771.512 kb on + strand at 771.512 kb on + strand at 771.512 kb on + strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.515 kb on + strand at 771.515 kb on + strand at 771.516 kb on - strand at 771.516 kb on - strand at 771.578 kb on - strand at 771.578 kb on - strand at 771.578 kb on - strand at 771.587 kb on - strand at 771.921 kb on + strand at 772.032 kb on - strand at 772.032 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 769,879 + AZOBR_RS29595 0.42 -3.5 769,879 + AZOBR_RS29595 0.42 +0.7 769,880 - AZOBR_RS29595 0.43 -0.1 769,891 + AZOBR_RS29595 0.44 +1.1 769,892 - AZOBR_RS29595 0.45 -0.1 770,225 + -3.8 770,285 + +0.0 770,379 + +1.0 770,380 - +0.9 770,380 - +1.0 770,380 - -1.1 770,651 + -0.9 770,651 + +1.0 770,664 + -1.3 770,665 - -4.8 770,665 - +0.2 770,702 + +0.3 770,914 + AZOBR_RS29600 0.52 -0.9 770,915 - AZOBR_RS29600 0.52 +2.1 770,926 + AZOBR_RS29600 0.56 +0.3 770,926 + AZOBR_RS29600 0.56 -4.4 770,927 - AZOBR_RS29600 0.56 +0.3 771,051 + +0.1 771,051 + -0.1 771,052 - -0.4 771,052 - +0.4 771,060 - -0.1 771,248 + +0.5 771,248 + +0.3 771,300 - +0.6 771,512 + -3.2 771,512 + +1.4 771,512 + -0.1 771,512 + +0.6 771,512 + -3.7 771,512 + +0.1 771,513 - +1.2 771,513 - +1.5 771,513 - -1.5 771,513 - +0.4 771,513 - -1.3 771,513 - +0.2 771,513 - -2.0 771,513 - -0.5 771,515 + +0.4 771,515 + +1.2 771,516 - +0.4 771,516 - +1.1 771,578 - +1.6 771,578 - +2.2 771,578 - +0.6 771,587 - -0.6 771,921 + +0.7 772,032 - +0.4 772,032 - +1.0
Or see this region's nucleotide sequence