Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29585 and AZOBR_RS29590 are separated by 30 nucleotides AZOBR_RS29590 and AZOBR_RS29595 overlap by 11 nucleotides
AZOBR_RS29585: AZOBR_RS29585 - hypothetical protein, at 768,559 to 768,846
_RS29585
AZOBR_RS29590: AZOBR_RS29590 - hypothetical protein, at 768,877 to 769,620
_RS29590
AZOBR_RS29595: AZOBR_RS29595 - hypothetical protein, at 769,610 to 770,242
_RS29595
Position (kb) 768
769
770 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 768.018 kb on - strand at 768.018 kb on - strand at 768.099 kb on + strand at 768.146 kb on + strand at 768.146 kb on + strand at 768.146 kb on + strand at 768.146 kb on + strand at 768.147 kb on - strand at 768.147 kb on - strand at 768.147 kb on - strand at 768.296 kb on + strand at 768.297 kb on - strand at 768.297 kb on - strand at 768.813 kb on + strand, within AZOBR_RS29585 at 768.814 kb on - strand, within AZOBR_RS29585 at 768.847 kb on + strand at 768.847 kb on + strand at 768.878 kb on + strand at 769.038 kb on + strand, within AZOBR_RS29590 at 769.038 kb on + strand, within AZOBR_RS29590 at 769.039 kb on - strand, within AZOBR_RS29590 at 769.072 kb on - strand, within AZOBR_RS29590 at 769.087 kb on + strand, within AZOBR_RS29590 at 769.087 kb on + strand, within AZOBR_RS29590 at 769.088 kb on - strand, within AZOBR_RS29590 at 769.088 kb on - strand, within AZOBR_RS29590 at 769.158 kb on - strand, within AZOBR_RS29590 at 769.158 kb on - strand, within AZOBR_RS29590 at 769.251 kb on - strand, within AZOBR_RS29590 at 769.251 kb on - strand, within AZOBR_RS29590 at 769.251 kb on - strand, within AZOBR_RS29590 at 769.643 kb on - strand at 769.707 kb on + strand, within AZOBR_RS29595 at 769.707 kb on + strand, within AZOBR_RS29595 at 769.707 kb on + strand, within AZOBR_RS29595 at 769.708 kb on - strand, within AZOBR_RS29595 at 769.708 kb on - strand, within AZOBR_RS29595 at 769.708 kb on - strand, within AZOBR_RS29595 at 769.708 kb on - strand, within AZOBR_RS29595 at 769.708 kb on - strand, within AZOBR_RS29595 at 769.722 kb on + strand, within AZOBR_RS29595 at 769.722 kb on + strand, within AZOBR_RS29595 at 769.723 kb on - strand, within AZOBR_RS29595 at 769.723 kb on - strand, within AZOBR_RS29595 at 769.879 kb on + strand, within AZOBR_RS29595 at 769.879 kb on + strand, within AZOBR_RS29595 at 769.880 kb on - strand, within AZOBR_RS29595 at 769.891 kb on + strand, within AZOBR_RS29595 at 769.892 kb on - strand, within AZOBR_RS29595 at 770.225 kb on + strand at 770.285 kb on + strand at 770.379 kb on + strand at 770.380 kb on - strand at 770.380 kb on - strand at 770.380 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 768,018 - +0.8 768,018 - +0.9 768,099 + -0.4 768,146 + +1.5 768,146 + +0.9 768,146 + +0.8 768,146 + -2.7 768,147 - -1.4 768,147 - +0.5 768,147 - +0.2 768,296 + -1.6 768,297 - -2.8 768,297 - +0.7 768,813 + AZOBR_RS29585 0.88 -3.1 768,814 - AZOBR_RS29585 0.89 -1.8 768,847 + +1.1 768,847 + -1.6 768,878 + -4.0 769,038 + AZOBR_RS29590 0.22 +0.0 769,038 + AZOBR_RS29590 0.22 -4.1 769,039 - AZOBR_RS29590 0.22 +0.7 769,072 - AZOBR_RS29590 0.26 +0.0 769,087 + AZOBR_RS29590 0.28 +0.2 769,087 + AZOBR_RS29590 0.28 +0.4 769,088 - AZOBR_RS29590 0.28 -1.1 769,088 - AZOBR_RS29590 0.28 -1.7 769,158 - AZOBR_RS29590 0.38 +0.9 769,158 - AZOBR_RS29590 0.38 +0.1 769,251 - AZOBR_RS29590 0.50 +0.2 769,251 - AZOBR_RS29590 0.50 -0.4 769,251 - AZOBR_RS29590 0.50 +1.1 769,643 - +0.3 769,707 + AZOBR_RS29595 0.15 +0.4 769,707 + AZOBR_RS29595 0.15 +1.3 769,707 + AZOBR_RS29595 0.15 +0.3 769,708 - AZOBR_RS29595 0.15 -3.0 769,708 - AZOBR_RS29595 0.15 +0.1 769,708 - AZOBR_RS29595 0.15 -0.1 769,708 - AZOBR_RS29595 0.15 -0.0 769,708 - AZOBR_RS29595 0.15 -1.5 769,722 + AZOBR_RS29595 0.18 +0.4 769,722 + AZOBR_RS29595 0.18 +0.7 769,723 - AZOBR_RS29595 0.18 -0.0 769,723 - AZOBR_RS29595 0.18 +0.7 769,879 + AZOBR_RS29595 0.42 -3.5 769,879 + AZOBR_RS29595 0.42 +0.7 769,880 - AZOBR_RS29595 0.43 -0.1 769,891 + AZOBR_RS29595 0.44 +1.1 769,892 - AZOBR_RS29595 0.45 -0.1 770,225 + -3.8 770,285 + +0.0 770,379 + +1.0 770,380 - +0.9 770,380 - +1.0 770,380 - -1.1
Or see this region's nucleotide sequence