Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27925 and AZOBR_RS27930 are separated by 13 nucleotides AZOBR_RS27930 and AZOBR_RS27935 are separated by 56 nucleotides
AZOBR_RS27925: AZOBR_RS27925 - oxidoreductase, at 434,918 to 436,093
_RS27925
AZOBR_RS27930: AZOBR_RS27930 - AP endonuclease, at 436,107 to 437,162
_RS27930
AZOBR_RS27935: AZOBR_RS27935 - ABC transporter substrate-binding protein, at 437,219 to 438,172
_RS27935
Position (kb) 436
437
438 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 435.655 kb on - strand, within AZOBR_RS27925 at 435.655 kb on - strand, within AZOBR_RS27925 at 435.882 kb on + strand, within AZOBR_RS27925 at 436.292 kb on - strand, within AZOBR_RS27930 at 436.459 kb on + strand, within AZOBR_RS27930 at 436.471 kb on + strand, within AZOBR_RS27930 at 436.721 kb on - strand, within AZOBR_RS27930 at 436.721 kb on - strand at 436.727 kb on - strand, within AZOBR_RS27930 at 436.886 kb on - strand, within AZOBR_RS27930 at 437.239 kb on - strand at 437.242 kb on - strand at 437.289 kb on + strand at 437.289 kb on + strand at 437.289 kb on + strand at 437.290 kb on - strand at 437.290 kb on - strand at 437.290 kb on - strand at 437.599 kb on - strand, within AZOBR_RS27935 at 437.778 kb on + strand, within AZOBR_RS27935 at 437.778 kb on + strand, within AZOBR_RS27935 at 437.778 kb on + strand, within AZOBR_RS27935 at 437.778 kb on + strand, within AZOBR_RS27935 at 437.779 kb on - strand, within AZOBR_RS27935 at 437.779 kb on - strand, within AZOBR_RS27935
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 435,655 - AZOBR_RS27925 0.63 +0.4 435,655 - AZOBR_RS27925 0.63 +1.5 435,882 + AZOBR_RS27925 0.82 -0.2 436,292 - AZOBR_RS27930 0.18 -1.4 436,459 + AZOBR_RS27930 0.33 +0.6 436,471 + AZOBR_RS27930 0.34 +0.8 436,721 - AZOBR_RS27930 0.58 -0.9 436,721 - +1.9 436,727 - AZOBR_RS27930 0.59 -0.8 436,886 - AZOBR_RS27930 0.74 +0.8 437,239 - -1.1 437,242 - -3.4 437,289 + +1.7 437,289 + -3.2 437,289 + +0.0 437,290 - -2.9 437,290 - +0.4 437,290 - +0.1 437,599 - AZOBR_RS27935 0.40 +0.1 437,778 + AZOBR_RS27935 0.59 -0.2 437,778 + AZOBR_RS27935 0.59 -1.5 437,778 + AZOBR_RS27935 0.59 -0.4 437,778 + AZOBR_RS27935 0.59 +1.1 437,779 - AZOBR_RS27935 0.59 +0.1 437,779 - AZOBR_RS27935 0.59 -1.3
Or see this region's nucleotide sequence