Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS24310 and AZOBR_RS24315 are separated by 31 nucleotides
AZOBR_RS24310: AZOBR_RS24310 - 3-methylitaconate isomerase, at 502,908 to 504,113
_RS24310
AZOBR_RS24315: AZOBR_RS24315 - carboxyvinyl-carboxyphosphonate phosphorylmutase, at 504,145 to 505,005
_RS24315
Position (kb) 504
505
506 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 503.163 kb on + strand, within AZOBR_RS24310 at 503.784 kb on + strand, within AZOBR_RS24310 at 503.784 kb on + strand, within AZOBR_RS24310 at 503.785 kb on - strand, within AZOBR_RS24310 at 503.785 kb on - strand, within AZOBR_RS24310 at 504.262 kb on + strand, within AZOBR_RS24315 at 504.262 kb on + strand, within AZOBR_RS24315 at 504.262 kb on + strand, within AZOBR_RS24315 at 504.262 kb on + strand, within AZOBR_RS24315 at 504.262 kb on + strand, within AZOBR_RS24315 at 504.262 kb on + strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.263 kb on - strand, within AZOBR_RS24315 at 504.424 kb on + strand, within AZOBR_RS24315 at 504.425 kb on - strand, within AZOBR_RS24315 at 504.836 kb on - strand, within AZOBR_RS24315 at 504.836 kb on - strand, within AZOBR_RS24315 at 504.997 kb on + strand at 504.997 kb on + strand at 504.998 kb on - strand at 504.998 kb on - strand at 504.998 kb on - strand at 505.043 kb on + strand at 505.044 kb on - strand at 505.044 kb on - strand at 505.090 kb on - strand at 505.090 kb on - strand at 505.156 kb on + strand at 505.260 kb on + strand at 505.438 kb on + strand at 505.439 kb on - strand at 505.439 kb on - strand at 505.523 kb on + strand at 505.523 kb on + strand at 505.523 kb on + strand at 505.523 kb on + strand at 505.523 kb on + strand at 505.523 kb on + strand at 505.524 kb on - strand at 505.524 kb on - strand at 505.524 kb on - strand at 505.524 kb on - strand at 505.524 kb on - strand at 505.524 kb on - strand at 505.524 kb on - strand at 505.525 kb on + strand at 505.526 kb on - strand at 505.561 kb on + strand at 505.561 kb on + strand at 505.562 kb on - strand at 505.562 kb on - strand at 505.576 kb on + strand at 505.576 kb on + strand at 505.576 kb on + strand at 505.576 kb on + strand at 505.577 kb on - strand at 505.577 kb on - strand at 505.577 kb on - strand at 505.577 kb on - strand at 505.577 kb on - strand at 505.577 kb on - strand at 505.683 kb on - strand at 505.683 kb on - strand at 505.845 kb on - strand at 505.988 kb on + strand at 505.988 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 503,163 + AZOBR_RS24310 0.21 -0.4 503,784 + AZOBR_RS24310 0.73 -1.1 503,784 + AZOBR_RS24310 0.73 +0.6 503,785 - AZOBR_RS24310 0.73 -1.1 503,785 - AZOBR_RS24310 0.73 +0.6 504,262 + AZOBR_RS24315 0.14 -0.4 504,262 + AZOBR_RS24315 0.14 -4.1 504,262 + AZOBR_RS24315 0.14 +1.1 504,262 + AZOBR_RS24315 0.14 -0.5 504,262 + AZOBR_RS24315 0.14 -4.2 504,262 + AZOBR_RS24315 0.14 -0.3 504,263 - AZOBR_RS24315 0.14 +4.0 504,263 - AZOBR_RS24315 0.14 -0.6 504,263 - AZOBR_RS24315 0.14 +0.8 504,263 - AZOBR_RS24315 0.14 -0.0 504,263 - AZOBR_RS24315 0.14 +2.3 504,263 - AZOBR_RS24315 0.14 -2.6 504,263 - AZOBR_RS24315 0.14 -0.8 504,424 + AZOBR_RS24315 0.32 +0.7 504,425 - AZOBR_RS24315 0.33 +1.4 504,836 - AZOBR_RS24315 0.80 -1.6 504,836 - AZOBR_RS24315 0.80 -0.2 504,997 + +1.2 504,997 + -0.5 504,998 - -1.2 504,998 - -0.4 504,998 - +1.5 505,043 + -1.4 505,044 - -0.1 505,044 - -3.6 505,090 - -0.4 505,090 - +0.4 505,156 + +0.1 505,260 + -2.3 505,438 + +0.5 505,439 - -1.3 505,439 - -1.1 505,523 + +1.2 505,523 + +0.6 505,523 + -0.5 505,523 + -0.9 505,523 + -0.3 505,523 + -0.1 505,524 - +1.2 505,524 - -0.0 505,524 - -0.1 505,524 - +0.6 505,524 - +0.7 505,524 - +0.9 505,524 - +1.6 505,525 + -0.4 505,526 - -1.5 505,561 + +0.4 505,561 + -0.1 505,562 - -4.2 505,562 - +0.7 505,576 + -1.6 505,576 + +0.2 505,576 + -0.4 505,576 + +0.5 505,577 - +1.2 505,577 - -1.0 505,577 - +1.2 505,577 - +1.7 505,577 - -2.8 505,577 - -2.7 505,683 - +0.2 505,683 - +0.2 505,845 - +0.7 505,988 + -1.1 505,988 + +0.5
Or see this region's nucleotide sequence