Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS24285 and AZOBR_RS22260 are separated by 143 nucleotides AZOBR_RS22260 and AZOBR_RS24290 are separated by 154 nucleotides AZOBR_RS24290 and AZOBR_RS24295 are separated by 53 nucleotides
AZOBR_RS24285: AZOBR_RS24285 - hypothetical protein, at 495,073 to 495,330
_RS24285
AZOBR_RS22260: AZOBR_RS22260 - cobalamin, at 495,474 to 495,722
_RS22260
AZOBR_RS24290: AZOBR_RS24290 - ribonucleotide-diphosphate reductase subunit alpha, at 495,877 to 497,751
_RS24290
AZOBR_RS24295: AZOBR_RS24295 - ribonucleotide-diphosphate reductase subunit beta, at 497,805 to 498,896
_RS24295
Position (kb) 495
496
497
498 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 495.271 kb on + strand, within AZOBR_RS24285 at 495.272 kb on - strand, within AZOBR_RS24285 at 495.514 kb on + strand, within AZOBR_RS22260 at 495.514 kb on + strand, within AZOBR_RS22260 at 495.520 kb on + strand, within AZOBR_RS22260 at 495.520 kb on + strand, within AZOBR_RS22260 at 495.521 kb on - strand, within AZOBR_RS22260 at 496.045 kb on + strand at 496.066 kb on + strand, within AZOBR_RS24290 at 496.067 kb on - strand, within AZOBR_RS24290 at 496.099 kb on + strand, within AZOBR_RS24290 at 496.099 kb on + strand, within AZOBR_RS24290 at 496.100 kb on - strand, within AZOBR_RS24290 at 496.132 kb on + strand, within AZOBR_RS24290 at 496.133 kb on - strand, within AZOBR_RS24290 at 496.312 kb on + strand, within AZOBR_RS24290 at 496.312 kb on + strand, within AZOBR_RS24290 at 496.312 kb on + strand, within AZOBR_RS24290 at 496.312 kb on + strand, within AZOBR_RS24290 at 496.312 kb on + strand, within AZOBR_RS24290 at 496.313 kb on - strand, within AZOBR_RS24290 at 496.362 kb on + strand, within AZOBR_RS24290 at 496.362 kb on + strand, within AZOBR_RS24290 at 496.363 kb on - strand, within AZOBR_RS24290 at 496.453 kb on + strand, within AZOBR_RS24290 at 496.453 kb on + strand, within AZOBR_RS24290 at 496.700 kb on - strand, within AZOBR_RS24290 at 497.293 kb on + strand, within AZOBR_RS24290 at 497.293 kb on + strand, within AZOBR_RS24290 at 497.293 kb on + strand, within AZOBR_RS24290 at 497.293 kb on + strand, within AZOBR_RS24290 at 497.294 kb on - strand, within AZOBR_RS24290 at 497.294 kb on - strand, within AZOBR_RS24290 at 497.294 kb on - strand, within AZOBR_RS24290 at 497.629 kb on + strand at 497.629 kb on + strand at 497.629 kb on + strand at 497.629 kb on + strand at 497.629 kb on + strand at 497.629 kb on + strand at 497.630 kb on - strand at 497.630 kb on - strand at 497.630 kb on - strand at 497.630 kb on - strand at 497.630 kb on - strand at 497.630 kb on - strand at 497.632 kb on + strand at 497.632 kb on + strand at 497.632 kb on + strand at 497.633 kb on - strand at 497.883 kb on + strand at 497.883 kb on + strand at 497.910 kb on + strand at 497.910 kb on + strand at 497.910 kb on + strand at 497.911 kb on - strand at 497.916 kb on + strand, within AZOBR_RS24295 at 498.078 kb on + strand, within AZOBR_RS24295 at 498.078 kb on + strand, within AZOBR_RS24295 at 498.091 kb on - strand, within AZOBR_RS24295 at 498.091 kb on - strand, within AZOBR_RS24295 at 498.172 kb on - strand, within AZOBR_RS24295 at 498.172 kb on - strand, within AZOBR_RS24295 at 498.172 kb on - strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.258 kb on + strand, within AZOBR_RS24295 at 498.259 kb on - strand, within AZOBR_RS24295 at 498.259 kb on - strand, within AZOBR_RS24295 at 498.624 kb on + strand, within AZOBR_RS24295 at 498.624 kb on + strand, within AZOBR_RS24295 at 498.624 kb on + strand, within AZOBR_RS24295 at 498.625 kb on - strand, within AZOBR_RS24295 at 498.625 kb on - strand, within AZOBR_RS24295 at 498.625 kb on - strand, within AZOBR_RS24295 at 498.625 kb on - strand, within AZOBR_RS24295 at 498.633 kb on + strand, within AZOBR_RS24295 at 498.633 kb on + strand, within AZOBR_RS24295 at 498.633 kb on + strand, within AZOBR_RS24295 at 498.634 kb on - strand, within AZOBR_RS24295 at 498.634 kb on - strand, within AZOBR_RS24295 at 498.678 kb on + strand, within AZOBR_RS24295 at 498.679 kb on - strand, within AZOBR_RS24295 at 498.679 kb on - strand, within AZOBR_RS24295 at 498.679 kb on - strand, within AZOBR_RS24295 at 498.709 kb on - strand, within AZOBR_RS24295
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 495,271 + AZOBR_RS24285 0.77 +0.9 495,272 - AZOBR_RS24285 0.77 -0.9 495,514 + AZOBR_RS22260 0.16 +0.6 495,514 + AZOBR_RS22260 0.16 -2.5 495,520 + AZOBR_RS22260 0.18 -2.6 495,520 + AZOBR_RS22260 0.18 -3.7 495,521 - AZOBR_RS22260 0.19 -0.6 496,045 + -0.5 496,066 + AZOBR_RS24290 0.10 +0.6 496,067 - AZOBR_RS24290 0.10 -0.6 496,099 + AZOBR_RS24290 0.12 -2.9 496,099 + AZOBR_RS24290 0.12 -0.3 496,100 - AZOBR_RS24290 0.12 +0.4 496,132 + AZOBR_RS24290 0.14 -2.5 496,133 - AZOBR_RS24290 0.14 -2.5 496,312 + AZOBR_RS24290 0.23 -2.7 496,312 + AZOBR_RS24290 0.23 -1.2 496,312 + AZOBR_RS24290 0.23 +0.5 496,312 + AZOBR_RS24290 0.23 +2.2 496,312 + AZOBR_RS24290 0.23 -0.4 496,313 - AZOBR_RS24290 0.23 -0.5 496,362 + AZOBR_RS24290 0.26 -0.5 496,362 + AZOBR_RS24290 0.26 -0.8 496,363 - AZOBR_RS24290 0.26 -0.4 496,453 + AZOBR_RS24290 0.31 +1.3 496,453 + AZOBR_RS24290 0.31 -2.1 496,700 - AZOBR_RS24290 0.44 +0.5 497,293 + AZOBR_RS24290 0.76 -1.9 497,293 + AZOBR_RS24290 0.76 -0.5 497,293 + AZOBR_RS24290 0.76 -0.2 497,293 + AZOBR_RS24290 0.76 -0.8 497,294 - AZOBR_RS24290 0.76 +0.9 497,294 - AZOBR_RS24290 0.76 -2.2 497,294 - AZOBR_RS24290 0.76 -0.0 497,629 + -0.5 497,629 + -0.3 497,629 + +0.5 497,629 + -2.5 497,629 + -0.6 497,629 + +3.1 497,630 - -0.8 497,630 - -1.3 497,630 - +0.4 497,630 - -2.5 497,630 - -1.0 497,630 - +0.1 497,632 + -1.2 497,632 + -1.1 497,632 + +0.0 497,633 - -0.7 497,883 + -1.4 497,883 + -0.0 497,910 + +0.1 497,910 + -1.2 497,910 + -0.1 497,911 - -2.8 497,916 + AZOBR_RS24295 0.10 -1.2 498,078 + AZOBR_RS24295 0.25 +0.0 498,078 + AZOBR_RS24295 0.25 -0.3 498,091 - AZOBR_RS24295 0.26 +0.2 498,091 - AZOBR_RS24295 0.26 -0.0 498,172 - AZOBR_RS24295 0.34 -1.6 498,172 - AZOBR_RS24295 0.34 -1.5 498,172 - AZOBR_RS24295 0.34 -3.5 498,258 + AZOBR_RS24295 0.41 +0.6 498,258 + AZOBR_RS24295 0.41 -1.2 498,258 + AZOBR_RS24295 0.41 -1.6 498,258 + AZOBR_RS24295 0.41 -0.3 498,258 + AZOBR_RS24295 0.41 -0.6 498,258 + AZOBR_RS24295 0.41 -0.5 498,259 - AZOBR_RS24295 0.42 -1.5 498,259 - AZOBR_RS24295 0.42 +0.3 498,624 + AZOBR_RS24295 0.75 -0.5 498,624 + AZOBR_RS24295 0.75 -0.9 498,624 + AZOBR_RS24295 0.75 -1.1 498,625 - AZOBR_RS24295 0.75 -0.8 498,625 - AZOBR_RS24295 0.75 +0.1 498,625 - AZOBR_RS24295 0.75 -0.3 498,625 - AZOBR_RS24295 0.75 +0.7 498,633 + AZOBR_RS24295 0.76 -0.4 498,633 + AZOBR_RS24295 0.76 +0.2 498,633 + AZOBR_RS24295 0.76 -2.4 498,634 - AZOBR_RS24295 0.76 -1.7 498,634 - AZOBR_RS24295 0.76 -2.6 498,678 + AZOBR_RS24295 0.80 -0.9 498,679 - AZOBR_RS24295 0.80 -0.6 498,679 - AZOBR_RS24295 0.80 +1.0 498,679 - AZOBR_RS24295 0.80 -0.0 498,709 - AZOBR_RS24295 0.83 +0.6
Or see this region's nucleotide sequence