Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS24060 and AZOBR_RS24065 are separated by 463 nucleotides AZOBR_RS24065 and AZOBR_RS24070 are separated by 296 nucleotides
AZOBR_RS24060: AZOBR_RS24060 - multidrug transporter, at 435,941 to 437,047
_RS24060
AZOBR_RS24065: AZOBR_RS24065 - aspartate aminotransferase, at 437,511 to 438,689
_RS24065
AZOBR_RS24070: AZOBR_RS24070 - acetyl-CoA hydrolase, at 438,986 to 440,479
_RS24070
Position (kb) 437
438
439 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 436.524 kb on + strand, within AZOBR_RS24060 at 436.525 kb on - strand, within AZOBR_RS24060 at 436.525 kb on - strand, within AZOBR_RS24060 at 436.584 kb on + strand, within AZOBR_RS24060 at 436.585 kb on - strand, within AZOBR_RS24060 at 437.286 kb on + strand at 437.308 kb on + strand at 437.308 kb on + strand at 437.308 kb on + strand at 437.308 kb on + strand at 437.308 kb on + strand at 437.308 kb on + strand at 437.308 kb on + strand at 437.308 kb on + strand at 437.324 kb on + strand at 437.342 kb on + strand at 437.890 kb on + strand, within AZOBR_RS24065 at 437.891 kb on - strand, within AZOBR_RS24065 at 437.918 kb on + strand, within AZOBR_RS24065 at 437.919 kb on - strand, within AZOBR_RS24065 at 437.919 kb on - strand, within AZOBR_RS24065 at 438.073 kb on + strand, within AZOBR_RS24065 at 438.073 kb on + strand, within AZOBR_RS24065 at 438.304 kb on + strand, within AZOBR_RS24065 at 438.305 kb on - strand, within AZOBR_RS24065 at 438.305 kb on - strand, within AZOBR_RS24065 at 438.305 kb on - strand, within AZOBR_RS24065 at 438.313 kb on + strand, within AZOBR_RS24065 at 438.314 kb on - strand, within AZOBR_RS24065 at 438.496 kb on + strand, within AZOBR_RS24065 at 438.496 kb on + strand, within AZOBR_RS24065 at 438.496 kb on + strand, within AZOBR_RS24065 at 438.497 kb on - strand, within AZOBR_RS24065 at 438.755 kb on - strand at 438.755 kb on - strand at 438.881 kb on + strand at 438.881 kb on + strand at 438.882 kb on - strand at 438.899 kb on + strand at 438.990 kb on - strand at 438.990 kb on - strand at 438.990 kb on - strand at 439.520 kb on + strand, within AZOBR_RS24070 at 439.520 kb on + strand, within AZOBR_RS24070 at 439.520 kb on + strand, within AZOBR_RS24070 at 439.521 kb on - strand, within AZOBR_RS24070 at 439.521 kb on - strand, within AZOBR_RS24070 at 439.521 kb on - strand, within AZOBR_RS24070 at 439.521 kb on - strand, within AZOBR_RS24070 at 439.521 kb on - strand, within AZOBR_RS24070
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 436,524 + AZOBR_RS24060 0.53 +1.3 436,525 - AZOBR_RS24060 0.53 +0.1 436,525 - AZOBR_RS24060 0.53 +0.6 436,584 + AZOBR_RS24060 0.58 +0.1 436,585 - AZOBR_RS24060 0.58 +3.1 437,286 + +0.2 437,308 + +0.8 437,308 + +1.0 437,308 + -1.1 437,308 + -1.5 437,308 + -0.2 437,308 + -0.1 437,308 + +0.5 437,308 + -1.7 437,324 + +0.4 437,342 + +0.1 437,890 + AZOBR_RS24065 0.32 -0.9 437,891 - AZOBR_RS24065 0.32 +0.5 437,918 + AZOBR_RS24065 0.35 -1.7 437,919 - AZOBR_RS24065 0.35 -0.8 437,919 - AZOBR_RS24065 0.35 +0.6 438,073 + AZOBR_RS24065 0.48 +0.7 438,073 + AZOBR_RS24065 0.48 +1.5 438,304 + AZOBR_RS24065 0.67 -1.9 438,305 - AZOBR_RS24065 0.67 +0.4 438,305 - AZOBR_RS24065 0.67 +1.0 438,305 - AZOBR_RS24065 0.67 -1.6 438,313 + AZOBR_RS24065 0.68 +0.8 438,314 - AZOBR_RS24065 0.68 +0.6 438,496 + AZOBR_RS24065 0.84 +1.6 438,496 + AZOBR_RS24065 0.84 +1.0 438,496 + AZOBR_RS24065 0.84 +0.2 438,497 - AZOBR_RS24065 0.84 -0.7 438,755 - -0.6 438,755 - -1.8 438,881 + +0.4 438,881 + -3.5 438,882 - -0.1 438,899 + -0.9 438,990 - -2.3 438,990 - +0.1 438,990 - +0.4 439,520 + AZOBR_RS24070 0.36 +1.3 439,520 + AZOBR_RS24070 0.36 -2.7 439,520 + AZOBR_RS24070 0.36 +0.6 439,521 - AZOBR_RS24070 0.36 -1.3 439,521 - AZOBR_RS24070 0.36 +1.5 439,521 - AZOBR_RS24070 0.36 -0.4 439,521 - AZOBR_RS24070 0.36 -0.0 439,521 - AZOBR_RS24070 0.36 -0.4
Or see this region's nucleotide sequence