Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23860 and AZOBR_RS23865 are separated by 78 nucleotides AZOBR_RS23865 and AZOBR_RS23870 are separated by 249 nucleotides AZOBR_RS23870 and AZOBR_RS23875 are separated by 105 nucleotides
AZOBR_RS23860: AZOBR_RS23860 - ABC transporter, at 384,479 to 385,519
_RS23860
AZOBR_RS23865: AZOBR_RS23865 - hypothetical protein, at 385,598 to 386,206
_RS23865
AZOBR_RS23870: AZOBR_RS23870 - hypothetical protein, at 386,456 to 386,650
_RS23870
AZOBR_RS23875: AZOBR_RS23875 - hypothetical protein, at 386,756 to 388,597
_RS23875
Position (kb) 385
386
387 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 385.369 kb on - strand, within AZOBR_RS23860 at 385.369 kb on - strand, within AZOBR_RS23860 at 385.369 kb on - strand, within AZOBR_RS23860 at 385.369 kb on - strand, within AZOBR_RS23860 at 385.671 kb on + strand, within AZOBR_RS23865 at 385.672 kb on - strand, within AZOBR_RS23865 at 385.672 kb on - strand, within AZOBR_RS23865 at 385.672 kb on - strand, within AZOBR_RS23865 at 385.672 kb on - strand, within AZOBR_RS23865 at 385.672 kb on - strand, within AZOBR_RS23865 at 385.776 kb on + strand, within AZOBR_RS23865 at 385.776 kb on + strand, within AZOBR_RS23865 at 385.776 kb on + strand, within AZOBR_RS23865 at 385.776 kb on + strand, within AZOBR_RS23865 at 385.776 kb on + strand, within AZOBR_RS23865 at 385.777 kb on - strand, within AZOBR_RS23865 at 385.777 kb on - strand, within AZOBR_RS23865 at 385.956 kb on + strand, within AZOBR_RS23865 at 385.957 kb on - strand, within AZOBR_RS23865 at 385.957 kb on - strand, within AZOBR_RS23865 at 386.223 kb on + strand at 386.223 kb on + strand at 386.272 kb on + strand at 386.272 kb on + strand at 386.273 kb on - strand at 386.273 kb on - strand at 386.273 kb on - strand at 386.273 kb on - strand at 386.562 kb on - strand, within AZOBR_RS23870 at 386.564 kb on - strand, within AZOBR_RS23870 at 386.953 kb on - strand, within AZOBR_RS23875 at 387.099 kb on + strand, within AZOBR_RS23875 at 387.100 kb on - strand, within AZOBR_RS23875 at 387.100 kb on - strand, within AZOBR_RS23875 at 387.196 kb on + strand, within AZOBR_RS23875 at 387.196 kb on + strand, within AZOBR_RS23875
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 385,369 - AZOBR_RS23860 0.85 +0.6 385,369 - AZOBR_RS23860 0.85 +1.3 385,369 - AZOBR_RS23860 0.85 +0.4 385,369 - AZOBR_RS23860 0.85 -0.9 385,671 + AZOBR_RS23865 0.12 -0.1 385,672 - AZOBR_RS23865 0.12 +1.0 385,672 - AZOBR_RS23865 0.12 -1.7 385,672 - AZOBR_RS23865 0.12 -0.2 385,672 - AZOBR_RS23865 0.12 -0.4 385,672 - AZOBR_RS23865 0.12 -2.8 385,776 + AZOBR_RS23865 0.29 -3.4 385,776 + AZOBR_RS23865 0.29 +0.4 385,776 + AZOBR_RS23865 0.29 -2.9 385,776 + AZOBR_RS23865 0.29 -4.6 385,776 + AZOBR_RS23865 0.29 +0.3 385,777 - AZOBR_RS23865 0.29 -2.0 385,777 - AZOBR_RS23865 0.29 +1.2 385,956 + AZOBR_RS23865 0.59 -3.0 385,957 - AZOBR_RS23865 0.59 -0.8 385,957 - AZOBR_RS23865 0.59 -2.7 386,223 + -1.2 386,223 + -0.1 386,272 + +0.5 386,272 + +0.1 386,273 - -2.2 386,273 - -3.4 386,273 - +0.1 386,273 - -0.8 386,562 - AZOBR_RS23870 0.54 +1.3 386,564 - AZOBR_RS23870 0.55 +0.7 386,953 - AZOBR_RS23875 0.11 +0.2 387,099 + AZOBR_RS23875 0.19 +1.1 387,100 - AZOBR_RS23875 0.19 -0.3 387,100 - AZOBR_RS23875 0.19 -0.2 387,196 + AZOBR_RS23875 0.24 +0.2 387,196 + AZOBR_RS23875 0.24 -2.0
Or see this region's nucleotide sequence