Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23680 and AZOBR_RS23685 are separated by 787 nucleotides
AZOBR_RS23680: AZOBR_RS23680 - hypothetical protein, at 346,621 to 347,577
_RS23680
AZOBR_RS23685: AZOBR_RS23685 - AsnC family transcriptional regulator, at 348,365 to 348,826
_RS23685
Position (kb) 346
347
348 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 345.692 kb on + strand at 345.693 kb on - strand at 345.693 kb on - strand at 345.708 kb on - strand at 345.785 kb on + strand at 345.785 kb on + strand at 345.852 kb on - strand at 345.852 kb on - strand at 345.852 kb on - strand at 345.867 kb on - strand at 345.867 kb on - strand at 345.971 kb on + strand at 345.972 kb on - strand at 345.972 kb on - strand at 345.972 kb on - strand at 345.972 kb on - strand at 345.972 kb on - strand at 346.070 kb on + strand at 346.071 kb on - strand at 346.121 kb on + strand at 346.122 kb on - strand at 346.430 kb on + strand at 346.617 kb on - strand at 346.617 kb on - strand at 346.968 kb on - strand, within AZOBR_RS23680 at 347.022 kb on - strand, within AZOBR_RS23680 at 347.022 kb on - strand, within AZOBR_RS23680 at 347.270 kb on + strand, within AZOBR_RS23680 at 347.270 kb on + strand, within AZOBR_RS23680 at 347.708 kb on + strand at 347.708 kb on + strand at 347.708 kb on + strand at 347.708 kb on + strand at 347.709 kb on - strand at 347.874 kb on - strand at 347.880 kb on + strand at 348.091 kb on + strand at 348.160 kb on - strand at 348.181 kb on - strand at 348.352 kb on + strand at 348.352 kb on + strand at 348.353 kb on + strand at 348.353 kb on - strand at 348.354 kb on + strand at 348.355 kb on - strand at 348.355 kb on - strand at 348.412 kb on - strand, within AZOBR_RS23685 at 348.472 kb on - strand, within AZOBR_RS23685 at 348.508 kb on - strand, within AZOBR_RS23685 at 348.508 kb on - strand, within AZOBR_RS23685 at 348.508 kb on - strand, within AZOBR_RS23685
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 345,692 + -0.4 345,693 - -1.7 345,693 - +1.4 345,708 - -1.5 345,785 + +1.1 345,785 + -0.2 345,852 - +0.6 345,852 - +0.3 345,852 - +1.1 345,867 - +0.8 345,867 - -1.0 345,971 + -1.0 345,972 - -0.3 345,972 - -1.1 345,972 - +1.2 345,972 - -3.2 345,972 - +0.7 346,070 + +0.4 346,071 - +1.8 346,121 + -3.0 346,122 - +1.1 346,430 + +2.5 346,617 - -0.1 346,617 - +0.1 346,968 - AZOBR_RS23680 0.36 -1.0 347,022 - AZOBR_RS23680 0.42 +0.1 347,022 - AZOBR_RS23680 0.42 +0.3 347,270 + AZOBR_RS23680 0.68 -1.6 347,270 + AZOBR_RS23680 0.68 +2.0 347,708 + +0.6 347,708 + -1.0 347,708 + -0.7 347,708 + -0.1 347,709 - -1.0 347,874 - -0.2 347,880 + +0.5 348,091 + +0.2 348,160 - -1.2 348,181 - +0.3 348,352 + -3.5 348,352 + +0.5 348,353 + +1.4 348,353 - -3.9 348,354 + +1.8 348,355 - -2.1 348,355 - -0.2 348,412 - AZOBR_RS23685 0.10 -2.6 348,472 - AZOBR_RS23685 0.23 -0.9 348,508 - AZOBR_RS23685 0.31 +0.7 348,508 - AZOBR_RS23685 0.31 -0.6 348,508 - AZOBR_RS23685 0.31 -0.8
Or see this region's nucleotide sequence