Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS22160 and AZOBR_RS22165 are separated by 101 nucleotides
AZOBR_RS22160: AZOBR_RS22160 - hypothetical protein, at 1,743,918 to 1,746,569
_RS22160
AZOBR_RS22165: AZOBR_RS22165 - peptidylprolyl isomerase, at 1,746,671 to 1,747,222
_RS22165
Position (kb)
1743
1744
1745
1746
1747 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1742.998 kb on - strand at 1743.359 kb on - strand at 1743.750 kb on - strand at 1743.826 kb on + strand at 1743.827 kb on - strand at 1743.827 kb on - strand at 1743.827 kb on - strand at 1743.827 kb on - strand at 1743.827 kb on - strand at 1743.902 kb on + strand at 1743.903 kb on - strand at 1744.932 kb on + strand, within AZOBR_RS22160 at 1745.734 kb on - strand, within AZOBR_RS22160 at 1745.779 kb on - strand, within AZOBR_RS22160 at 1745.779 kb on - strand, within AZOBR_RS22160 at 1745.779 kb on - strand, within AZOBR_RS22160 at 1745.779 kb on - strand, within AZOBR_RS22160 at 1746.182 kb on + strand, within AZOBR_RS22160 at 1746.304 kb on - strand at 1746.342 kb on + strand at 1746.363 kb on + strand at 1746.364 kb on - strand at 1746.366 kb on + strand at 1746.367 kb on - strand at 1746.367 kb on - strand at 1746.367 kb on - strand at 1746.672 kb on + strand at 1746.805 kb on - strand, within AZOBR_RS22165 at 1746.805 kb on - strand, within AZOBR_RS22165 at 1746.805 kb on - strand, within AZOBR_RS22165 at 1747.026 kb on + strand, within AZOBR_RS22165 at 1747.027 kb on - strand, within AZOBR_RS22165 at 1747.125 kb on + strand, within AZOBR_RS22165 at 1747.125 kb on + strand, within AZOBR_RS22165 at 1747.126 kb on - strand, within AZOBR_RS22165 at 1747.126 kb on - strand, within AZOBR_RS22165 at 1747.126 kb on - strand, within AZOBR_RS22165 at 1747.392 kb on + strand at 1747.393 kb on - strand at 1747.393 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 1,742,998 - -1.8 1,743,359 - -3.3 1,743,750 - +1.1 1,743,826 + +1.3 1,743,827 - +0.6 1,743,827 - +0.1 1,743,827 - -0.2 1,743,827 - -0.0 1,743,827 - -0.9 1,743,902 + +0.6 1,743,903 - +0.2 1,744,932 + AZOBR_RS22160 0.38 -0.4 1,745,734 - AZOBR_RS22160 0.68 -2.7 1,745,779 - AZOBR_RS22160 0.70 -0.4 1,745,779 - AZOBR_RS22160 0.70 +0.8 1,745,779 - AZOBR_RS22160 0.70 +1.7 1,745,779 - AZOBR_RS22160 0.70 +0.1 1,746,182 + AZOBR_RS22160 0.85 -1.3 1,746,304 - -1.6 1,746,342 + -0.6 1,746,363 + -0.9 1,746,364 - -0.4 1,746,366 + -2.4 1,746,367 - -0.1 1,746,367 - +0.5 1,746,367 - -1.3 1,746,672 + -1.3 1,746,805 - AZOBR_RS22165 0.24 +1.9 1,746,805 - AZOBR_RS22165 0.24 -0.3 1,746,805 - AZOBR_RS22165 0.24 +0.3 1,747,026 + AZOBR_RS22165 0.64 -3.1 1,747,027 - AZOBR_RS22165 0.64 -2.3 1,747,125 + AZOBR_RS22165 0.82 +0.7 1,747,125 + AZOBR_RS22165 0.82 -2.2 1,747,126 - AZOBR_RS22165 0.82 -0.3 1,747,126 - AZOBR_RS22165 0.82 +0.8 1,747,126 - AZOBR_RS22165 0.82 +0.4 1,747,392 + -3.0 1,747,393 - -0.5 1,747,393 - -1.0
Or see this region's nucleotide sequence