Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS20250
Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,310,798 | + | +1.4 | |||
1,310,991 | - | AZOBR_RS20245 | 0.28 | +0.4 | |
1,310,991 | - | AZOBR_RS20245 | 0.28 | -0.1 | |
1,311,062 | + | AZOBR_RS20245 | 0.38 | +0.4 | |
1,311,062 | + | AZOBR_RS20245 | 0.38 | -0.3 | |
1,311,062 | + | AZOBR_RS20245 | 0.38 | -1.9 | |
1,311,083 | + | AZOBR_RS20245 | 0.41 | -1.2 | |
1,311,117 | - | AZOBR_RS20245 | 0.46 | -2.4 | |
1,311,251 | + | AZOBR_RS20245 | 0.65 | +0.3 | |
1,311,251 | + | AZOBR_RS20245 | 0.65 | -0.9 | |
1,311,252 | - | AZOBR_RS20245 | 0.65 | -0.6 | |
1,311,252 | - | AZOBR_RS20245 | 0.65 | +0.8 | |
1,311,275 | + | AZOBR_RS20245 | 0.68 | +0.8 | |
1,311,276 | - | AZOBR_RS20245 | 0.69 | -0.0 | |
1,311,541 | + | -0.6 | |||
1,311,556 | + | -3.1 | |||
1,311,556 | + | -3.0 | |||
1,311,730 | - | AZOBR_RS20250 | 0.16 | -0.5 | |
1,311,841 | - | AZOBR_RS20250 | 0.39 | -0.2 | |
1,311,912 | + | AZOBR_RS20250 | 0.54 | -2.3 | |
1,311,913 | - | AZOBR_RS20250 | 0.54 | -0.4 | |
1,311,930 | + | AZOBR_RS20250 | 0.58 | +0.1 | |
1,311,931 | - | AZOBR_RS20250 | 0.58 | -0.5 | |
1,312,326 | - | +0.2 | |||
1,312,386 | + | +0.6 | |||
1,312,386 | + | -0.4 | |||
1,312,387 | - | +0.1 | |||
1,312,529 | + | -1.9 | |||
1,312,629 | + | +0.1 |
Or see this region's nucleotide sequence