Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16735 and AZOBR_RS16740 overlap by 4 nucleotides AZOBR_RS16740 and AZOBR_RS16745 are separated by 10 nucleotides AZOBR_RS16745 and AZOBR_RS16750 are separated by 73 nucleotides
AZOBR_RS16735: AZOBR_RS16735 - cobyrinic acid a c-diamide synthase, at 511,469 to 512,800
_RS16735
AZOBR_RS16740: AZOBR_RS16740 - cob(II)yrinic acid a c-diamide reductase, at 512,797 to 513,456
_RS16740
AZOBR_RS16745: AZOBR_RS16745 - oxidoreductase, at 513,467 to 514,180
_RS16745
AZOBR_RS16750: AZOBR_RS16750 - TetR family transcriptional regulator, at 514,254 to 514,853
_RS16750
Position (kb) 512
513
514 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 511.901 kb on + strand, within AZOBR_RS16735 at 511.901 kb on + strand, within AZOBR_RS16735 at 512.357 kb on + strand, within AZOBR_RS16735 at 512.358 kb on - strand, within AZOBR_RS16735 at 512.358 kb on - strand, within AZOBR_RS16735 at 512.358 kb on - strand, within AZOBR_RS16735 at 512.460 kb on - strand, within AZOBR_RS16735 at 512.477 kb on + strand, within AZOBR_RS16735 at 512.478 kb on - strand, within AZOBR_RS16735 at 512.660 kb on + strand, within AZOBR_RS16735 at 512.839 kb on + strand at 512.840 kb on - strand at 512.840 kb on - strand at 512.840 kb on - strand at 512.840 kb on - strand at 513.076 kb on + strand, within AZOBR_RS16740 at 513.077 kb on - strand, within AZOBR_RS16740 at 513.077 kb on - strand, within AZOBR_RS16740 at 513.196 kb on + strand, within AZOBR_RS16740 at 513.335 kb on - strand, within AZOBR_RS16740 at 513.454 kb on + strand at 513.455 kb on - strand at 513.849 kb on + strand, within AZOBR_RS16745 at 513.977 kb on - strand, within AZOBR_RS16745 at 513.977 kb on - strand, within AZOBR_RS16745 at 514.071 kb on + strand, within AZOBR_RS16745 at 514.071 kb on + strand, within AZOBR_RS16745 at 514.072 kb on - strand, within AZOBR_RS16745 at 514.353 kb on + strand, within AZOBR_RS16750 at 514.354 kb on - strand, within AZOBR_RS16750 at 514.414 kb on - strand, within AZOBR_RS16750
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 511,901 + AZOBR_RS16735 0.32 +1.1 511,901 + AZOBR_RS16735 0.32 +2.1 512,357 + AZOBR_RS16735 0.67 +0.3 512,358 - AZOBR_RS16735 0.67 +0.9 512,358 - AZOBR_RS16735 0.67 +0.5 512,358 - AZOBR_RS16735 0.67 +1.4 512,460 - AZOBR_RS16735 0.74 +1.9 512,477 + AZOBR_RS16735 0.76 +1.0 512,478 - AZOBR_RS16735 0.76 +0.8 512,660 + AZOBR_RS16735 0.89 +1.4 512,839 + -0.2 512,840 - -0.7 512,840 - +0.5 512,840 - +1.2 512,840 - -3.8 513,076 + AZOBR_RS16740 0.42 +1.1 513,077 - AZOBR_RS16740 0.42 +1.0 513,077 - AZOBR_RS16740 0.42 -1.6 513,196 + AZOBR_RS16740 0.60 +1.1 513,335 - AZOBR_RS16740 0.82 -3.7 513,454 + -0.7 513,455 - +0.8 513,849 + AZOBR_RS16745 0.54 -0.3 513,977 - AZOBR_RS16745 0.71 +0.4 513,977 - AZOBR_RS16745 0.71 +0.4 514,071 + AZOBR_RS16745 0.85 +0.9 514,071 + AZOBR_RS16745 0.85 -1.6 514,072 - AZOBR_RS16745 0.85 +0.2 514,353 + AZOBR_RS16750 0.17 +1.3 514,354 - AZOBR_RS16750 0.17 +0.8 514,414 - AZOBR_RS16750 0.27 +0.4
Or see this region's nucleotide sequence