Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16510 and AZOBR_RS16515 are separated by 7 nucleotides AZOBR_RS16515 and AZOBR_RS16520 are separated by 130 nucleotides
AZOBR_RS16510: AZOBR_RS16510 - S-formylglutathione hydrolase, at 454,783 to 455,646
_RS16510
AZOBR_RS16515: AZOBR_RS16515 - S-(hydroxymethyl)glutathione dehydrogenase, at 455,654 to 456,772
_RS16515
AZOBR_RS16520: AZOBR_RS16520 - LysR family transcriptional regulator, at 456,903 to 457,820
_RS16520
Position (kb) 455
456
457 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 454.735 kb on + strand at 454.736 kb on - strand at 454.736 kb on - strand at 454.764 kb on + strand at 454.765 kb on - strand at 454.850 kb on + strand at 454.850 kb on + strand at 454.851 kb on - strand at 455.043 kb on - strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.259 kb on - strand, within AZOBR_RS16510 at 455.259 kb on - strand, within AZOBR_RS16510 at 455.259 kb on - strand, within AZOBR_RS16510 at 455.483 kb on + strand, within AZOBR_RS16510 at 455.537 kb on + strand, within AZOBR_RS16510 at 455.537 kb on + strand, within AZOBR_RS16510 at 455.538 kb on - strand, within AZOBR_RS16510 at 455.538 kb on - strand, within AZOBR_RS16510 at 455.664 kb on + strand at 455.665 kb on - strand at 455.793 kb on + strand, within AZOBR_RS16515 at 455.794 kb on - strand, within AZOBR_RS16515 at 455.995 kb on - strand, within AZOBR_RS16515 at 456.048 kb on + strand, within AZOBR_RS16515 at 456.048 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.636 kb on + strand, within AZOBR_RS16515 at 456.636 kb on + strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 457.051 kb on - strand, within AZOBR_RS16520 at 457.207 kb on - strand, within AZOBR_RS16520 at 457.413 kb on + strand, within AZOBR_RS16520 at 457.645 kb on - strand, within AZOBR_RS16520 at 457.645 kb on - strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.647 kb on + strand, within AZOBR_RS16520 at 457.648 kb on - strand, within AZOBR_RS16520 at 457.648 kb on - strand, within AZOBR_RS16520 at 457.648 kb on - strand, within AZOBR_RS16520 at 457.648 kb on - strand, within AZOBR_RS16520 at 457.731 kb on + strand at 457.732 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 454,735 + -2.2 454,736 - -1.9 454,736 - +0.6 454,764 + +0.3 454,765 - -1.8 454,850 + +1.8 454,850 + -0.9 454,851 - -0.5 455,043 - AZOBR_RS16510 0.30 +2.9 455,258 + AZOBR_RS16510 0.55 -3.5 455,258 + AZOBR_RS16510 0.55 -0.2 455,258 + AZOBR_RS16510 0.55 -1.0 455,258 + AZOBR_RS16510 0.55 -0.3 455,258 + AZOBR_RS16510 0.55 +2.0 455,259 - AZOBR_RS16510 0.55 +0.3 455,259 - AZOBR_RS16510 0.55 +0.6 455,259 - AZOBR_RS16510 0.55 +1.4 455,483 + AZOBR_RS16510 0.81 +1.2 455,537 + AZOBR_RS16510 0.87 +0.9 455,537 + AZOBR_RS16510 0.87 +0.3 455,538 - AZOBR_RS16510 0.87 +0.3 455,538 - AZOBR_RS16510 0.87 -1.8 455,664 + -3.2 455,665 - -0.7 455,793 + AZOBR_RS16515 0.12 -0.5 455,794 - AZOBR_RS16515 0.13 -2.6 455,995 - AZOBR_RS16515 0.30 +1.2 456,048 + AZOBR_RS16515 0.35 +0.2 456,048 + AZOBR_RS16515 0.35 +0.1 456,366 + AZOBR_RS16515 0.64 +0.3 456,366 + AZOBR_RS16515 0.64 -1.2 456,366 + AZOBR_RS16515 0.64 +0.6 456,366 + AZOBR_RS16515 0.64 +0.9 456,366 + AZOBR_RS16515 0.64 -1.0 456,367 - AZOBR_RS16515 0.64 +1.0 456,367 - AZOBR_RS16515 0.64 +1.2 456,367 - AZOBR_RS16515 0.64 -4.0 456,367 - AZOBR_RS16515 0.64 -0.1 456,367 - AZOBR_RS16515 0.64 +0.1 456,367 - AZOBR_RS16515 0.64 +1.2 456,636 + AZOBR_RS16515 0.88 -0.8 456,636 + AZOBR_RS16515 0.88 -3.5 456,637 - AZOBR_RS16515 0.88 +0.7 456,637 - AZOBR_RS16515 0.88 -0.9 456,637 - AZOBR_RS16515 0.88 -0.2 456,637 - AZOBR_RS16515 0.88 -0.5 457,051 - AZOBR_RS16520 0.16 +1.4 457,207 - AZOBR_RS16520 0.33 +0.7 457,413 + AZOBR_RS16520 0.56 +0.1 457,645 - AZOBR_RS16520 0.81 +0.4 457,645 - AZOBR_RS16520 0.81 -0.2 457,647 + AZOBR_RS16520 0.81 +0.4 457,647 + AZOBR_RS16520 0.81 +0.6 457,647 + AZOBR_RS16520 0.81 -2.9 457,647 + AZOBR_RS16520 0.81 -0.3 457,647 + AZOBR_RS16520 0.81 +0.1 457,648 - AZOBR_RS16520 0.81 +0.3 457,648 - AZOBR_RS16520 0.81 +0.4 457,648 - AZOBR_RS16520 0.81 -1.1 457,648 - AZOBR_RS16520 0.81 -0.7 457,731 + -0.2 457,732 - +0.8
Or see this region's nucleotide sequence