Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS15770 and AZOBR_RS15775 are separated by 170 nucleotides AZOBR_RS15775 and AZOBR_RS15780 are separated by 104 nucleotides
AZOBR_RS15770: AZOBR_RS15770 - osmoprotectant uptake system substrate-binding protein, at 288,671 to 289,591
_RS15770
AZOBR_RS15775: AZOBR_RS15775 - ferrochelatase, at 289,762 to 290,811
_RS15775
AZOBR_RS15780: AZOBR_RS15780 - transcriptional regulator, at 290,916 to 291,557
_RS15780
Position (kb) 289
290
291 Strain fitness (log2 ratio) -2
-1
0
1
2 at 288.861 kb on + strand, within AZOBR_RS15770 at 288.861 kb on + strand, within AZOBR_RS15770 at 288.862 kb on - strand, within AZOBR_RS15770 at 289.045 kb on - strand, within AZOBR_RS15770 at 289.275 kb on + strand, within AZOBR_RS15770 at 289.344 kb on + strand, within AZOBR_RS15770 at 290.828 kb on + strand at 290.828 kb on + strand at 290.828 kb on + strand at 290.829 kb on - strand at 290.829 kb on - strand at 290.829 kb on - strand at 290.829 kb on - strand at 290.829 kb on - strand at 290.831 kb on + strand at 290.868 kb on + strand at 290.868 kb on + strand at 290.868 kb on + strand at 290.917 kb on + strand at 290.917 kb on + strand at 290.917 kb on + strand at 290.917 kb on + strand at 290.917 kb on + strand at 290.918 kb on - strand at 290.918 kb on - strand at 290.918 kb on - strand at 290.918 kb on - strand at 290.918 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 288,861 + AZOBR_RS15770 0.21 -0.9 288,861 + AZOBR_RS15770 0.21 +0.9 288,862 - AZOBR_RS15770 0.21 +0.4 289,045 - AZOBR_RS15770 0.41 -0.1 289,275 + AZOBR_RS15770 0.66 +0.0 289,344 + AZOBR_RS15770 0.73 +2.6 290,828 + -0.0 290,828 + +1.0 290,828 + +1.1 290,829 - +0.2 290,829 - -1.0 290,829 - +1.7 290,829 - +0.4 290,829 - -0.2 290,831 + -0.2 290,868 + -0.3 290,868 + -2.0 290,868 + +1.5 290,917 + -0.2 290,917 + +0.2 290,917 + +0.1 290,917 + +0.0 290,917 + +0.6 290,918 - +1.1 290,918 - +0.8 290,918 - +1.3 290,918 - +0.4 290,918 - +0.1
Or see this region's nucleotide sequence