Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS14500 and AZOBR_RS14505 are separated by 7 nucleotides AZOBR_RS14505 and AZOBR_RS14510 are separated by 11 nucleotides AZOBR_RS14510 and AZOBR_RS14515 are separated by 10 nucleotides
AZOBR_RS14500: AZOBR_RS14500 - nucleoside triphosphate pyrophosphohydrolase, at 22,783 to 23,592
_RS14500
AZOBR_RS14505: AZOBR_RS14505 - hydrogenase, at 23,600 to 24,121
_RS14505
AZOBR_RS14510: AZOBR_RS14510 - hydrogenase expression protein HypE, at 24,133 to 25,674
_RS14510
AZOBR_RS14515: AZOBR_RS14515 - oxidoreductase, at 25,685 to 27,142
_RS14515
Position (kb) 24
25
26 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 23.725 kb on - strand, within AZOBR_RS14505 at 23.913 kb on + strand, within AZOBR_RS14505 at 24.134 kb on + strand at 24.134 kb on + strand at 24.134 kb on + strand at 24.134 kb on + strand at 24.135 kb on - strand at 24.153 kb on - strand at 24.524 kb on + strand, within AZOBR_RS14510 at 24.671 kb on + strand, within AZOBR_RS14510 at 24.671 kb on + strand, within AZOBR_RS14510 at 24.672 kb on - strand, within AZOBR_RS14510 at 24.672 kb on - strand, within AZOBR_RS14510 at 24.672 kb on - strand, within AZOBR_RS14510 at 24.672 kb on - strand, within AZOBR_RS14510 at 25.250 kb on + strand, within AZOBR_RS14510 at 25.251 kb on - strand, within AZOBR_RS14510 at 25.367 kb on + strand, within AZOBR_RS14510 at 25.368 kb on - strand, within AZOBR_RS14510 at 25.671 kb on - strand at 25.671 kb on - strand at 25.776 kb on + strand at 26.119 kb on - strand, within AZOBR_RS14515 at 26.222 kb on - strand, within AZOBR_RS14515 at 26.238 kb on + strand, within AZOBR_RS14515 at 26.625 kb on + strand, within AZOBR_RS14515 at 26.625 kb on + strand, within AZOBR_RS14515 at 26.625 kb on + strand, within AZOBR_RS14515 at 26.625 kb on + strand, within AZOBR_RS14515 at 26.626 kb on - strand, within AZOBR_RS14515 at 26.626 kb on - strand, within AZOBR_RS14515 at 26.626 kb on - strand, within AZOBR_RS14515 at 26.626 kb on - strand, within AZOBR_RS14515
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 23,725 - AZOBR_RS14505 0.24 -3.6 23,913 + AZOBR_RS14505 0.60 +0.0 24,134 + -1.1 24,134 + -2.1 24,134 + +0.4 24,134 + +0.3 24,135 - -2.1 24,153 - -1.0 24,524 + AZOBR_RS14510 0.25 -0.2 24,671 + AZOBR_RS14510 0.35 +0.0 24,671 + AZOBR_RS14510 0.35 -0.1 24,672 - AZOBR_RS14510 0.35 -0.9 24,672 - AZOBR_RS14510 0.35 +0.7 24,672 - AZOBR_RS14510 0.35 -0.6 24,672 - AZOBR_RS14510 0.35 -1.2 25,250 + AZOBR_RS14510 0.72 +0.5 25,251 - AZOBR_RS14510 0.73 -0.0 25,367 + AZOBR_RS14510 0.80 +1.2 25,368 - AZOBR_RS14510 0.80 +2.1 25,671 - -0.0 25,671 - +0.5 25,776 + -0.0 26,119 - AZOBR_RS14515 0.30 +0.6 26,222 - AZOBR_RS14515 0.37 +0.6 26,238 + AZOBR_RS14515 0.38 +0.7 26,625 + AZOBR_RS14515 0.64 -0.6 26,625 + AZOBR_RS14515 0.64 +0.1 26,625 + AZOBR_RS14515 0.64 +1.1 26,625 + AZOBR_RS14515 0.64 +0.3 26,626 - AZOBR_RS14515 0.65 +0.4 26,626 - AZOBR_RS14515 0.65 -0.9 26,626 - AZOBR_RS14515 0.65 +0.3 26,626 - AZOBR_RS14515 0.65 +0.8
Or see this region's nucleotide sequence