Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS13560

Experiment: D-Cycloserine 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.125 mg/ml
2,876,660	+				+0.5
2,876,660	+				+0.9
2,876,752	-				+0.3
2,877,280	-				+0.7
2,877,737	+		AZOBR_RS13560	0.17	-3.2
2,877,738	-		AZOBR_RS13560	0.17	-2.1
2,878,127	+		AZOBR_RS13560	0.38	+0.2
2,878,127	+		AZOBR_RS13560	0.38	-0.6
2,878,191	-		AZOBR_RS13560	0.41	-0.7
2,878,212	-		AZOBR_RS13560	0.42	+0.4
2,878,212	-		AZOBR_RS13560	0.42	+1.2
2,878,212	-		AZOBR_RS13560	0.42	+2.4
2,878,367	+		AZOBR_RS13560	0.50	-0.5
2,878,367	+		AZOBR_RS13560	0.50	+0.2
2,878,367	+		AZOBR_RS13560	0.50	+0.3
2,878,367	+		AZOBR_RS13560	0.50	-0.1
2,878,367	+		AZOBR_RS13560	0.50	+0.7
2,878,368	-		AZOBR_RS13560	0.50	-4.0
2,878,368	-		AZOBR_RS13560	0.50	-0.2
2,878,838	+		AZOBR_RS13560	0.75	+1.5
2,878,838	+		AZOBR_RS13560	0.75	-1.0
2,878,838	+		AZOBR_RS13560	0.75	+0.2
2,878,839	-		AZOBR_RS13560	0.75	-2.0
2,878,839	-		AZOBR_RS13560	0.75	-0.3
2,878,874	+		AZOBR_RS13560	0.77	-1.6
2,878,874	+		AZOBR_RS13560	0.77	+0.1
2,878,875	-		AZOBR_RS13560	0.77	-0.2
2,878,875	-		AZOBR_RS13560	0.77	-3.1
2,878,875	-		AZOBR_RS13560	0.77	-0.2
2,879,045	+		AZOBR_RS13560	0.86	-1.6
2,879,046	-		AZOBR_RS13560	0.86	-2.9
2,879,081	+		AZOBR_RS13560	0.88	-2.0
2,879,081	+		AZOBR_RS13560	0.88	-4.3
2,879,081	+		AZOBR_RS13560	0.88	+0.4
2,879,082	-		AZOBR_RS13560	0.88	-3.7
2,879,082	-		AZOBR_RS13560	0.88	-2.0
2,879,082	-		AZOBR_RS13560	0.88	-0.6
2,879,222	+				-0.4
2,879,280	+				-2.3
2,879,280	+				+3.0
2,879,281	-				+1.1
2,879,530	+		AZOBR_RS13565	0.39	-0.2
2,879,530	+		AZOBR_RS13565	0.39	+0.2
2,879,531	-		AZOBR_RS13565	0.39	-2.5
2,879,531	-		AZOBR_RS13565	0.39	-0.4
2,879,531	-		AZOBR_RS13565	0.39	+0.6
2,880,180	-		AZOBR_RS13570	0.47	-2.8
2,880,259	+		AZOBR_RS13570	0.76	+0.5
2,880,260	-		AZOBR_RS13570	0.76	-0.5
2,880,286	+		AZOBR_RS13570	0.86	+0.0
2,880,287	-		AZOBR_RS13570	0.86	+0.6