Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13075 and AZOBR_RS13080 are separated by 309 nucleotides AZOBR_RS13080 and AZOBR_RS13085 overlap by 4 nucleotides
AZOBR_RS13075: AZOBR_RS13075 - sulfonate ABC transporter ATP-binding protein, at 2,759,844 to 2,760,596
_RS13075
AZOBR_RS13080: AZOBR_RS13080 - putative MFS superfamily multidrug transport protein, at 2,760,906 to 2,762,150
_RS13080
AZOBR_RS13085: AZOBR_RS13085 - putative sulfate ester transport system substrate-binding protein, at 2,762,147 to 2,763,202
_RS13085
Position (kb)
2760
2761
2762
2763 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2760.030 kb on + strand, within AZOBR_RS13075 at 2760.031 kb on - strand, within AZOBR_RS13075 at 2760.631 kb on + strand at 2760.631 kb on + strand at 2760.631 kb on + strand at 2760.631 kb on + strand at 2760.631 kb on + strand at 2760.631 kb on + strand at 2760.632 kb on - strand at 2760.632 kb on - strand at 2760.632 kb on - strand at 2761.024 kb on - strand at 2761.260 kb on + strand, within AZOBR_RS13080 at 2761.260 kb on + strand, within AZOBR_RS13080 at 2761.261 kb on - strand, within AZOBR_RS13080 at 2761.261 kb on - strand, within AZOBR_RS13080 at 2761.404 kb on + strand, within AZOBR_RS13080 at 2761.404 kb on + strand, within AZOBR_RS13080 at 2761.405 kb on - strand, within AZOBR_RS13080 at 2761.405 kb on - strand, within AZOBR_RS13080 at 2761.566 kb on + strand, within AZOBR_RS13080 at 2761.567 kb on - strand, within AZOBR_RS13080 at 2762.354 kb on + strand, within AZOBR_RS13085 at 2762.354 kb on + strand, within AZOBR_RS13085 at 2762.354 kb on + strand, within AZOBR_RS13085 at 2762.354 kb on + strand, within AZOBR_RS13085 at 2762.355 kb on - strand, within AZOBR_RS13085 at 2762.355 kb on - strand, within AZOBR_RS13085 at 2762.355 kb on - strand, within AZOBR_RS13085 at 2762.355 kb on - strand, within AZOBR_RS13085 at 2762.420 kb on + strand, within AZOBR_RS13085 at 2762.420 kb on + strand, within AZOBR_RS13085 at 2762.785 kb on + strand, within AZOBR_RS13085 at 2762.972 kb on + strand, within AZOBR_RS13085 at 2762.973 kb on - strand, within AZOBR_RS13085 at 2763.116 kb on + strand at 2763.116 kb on + strand at 2763.116 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 2,760,030 + AZOBR_RS13075 0.25 +1.0 2,760,031 - AZOBR_RS13075 0.25 +0.1 2,760,631 + +0.7 2,760,631 + -0.0 2,760,631 + -1.9 2,760,631 + -0.0 2,760,631 + +0.4 2,760,631 + +0.7 2,760,632 - +0.1 2,760,632 - +1.4 2,760,632 - +0.4 2,761,024 - +0.5 2,761,260 + AZOBR_RS13080 0.28 +0.9 2,761,260 + AZOBR_RS13080 0.28 +1.4 2,761,261 - AZOBR_RS13080 0.29 -2.1 2,761,261 - AZOBR_RS13080 0.29 +1.8 2,761,404 + AZOBR_RS13080 0.40 +0.4 2,761,404 + AZOBR_RS13080 0.40 +0.0 2,761,405 - AZOBR_RS13080 0.40 +1.2 2,761,405 - AZOBR_RS13080 0.40 +0.6 2,761,566 + AZOBR_RS13080 0.53 +1.8 2,761,567 - AZOBR_RS13080 0.53 -3.7 2,762,354 + AZOBR_RS13085 0.20 -0.1 2,762,354 + AZOBR_RS13085 0.20 +1.1 2,762,354 + AZOBR_RS13085 0.20 -0.9 2,762,354 + AZOBR_RS13085 0.20 +1.2 2,762,355 - AZOBR_RS13085 0.20 -0.2 2,762,355 - AZOBR_RS13085 0.20 +0.5 2,762,355 - AZOBR_RS13085 0.20 +0.4 2,762,355 - AZOBR_RS13085 0.20 +0.8 2,762,420 + AZOBR_RS13085 0.26 -0.3 2,762,420 + AZOBR_RS13085 0.26 +1.4 2,762,785 + AZOBR_RS13085 0.60 +0.3 2,762,972 + AZOBR_RS13085 0.78 +2.0 2,762,973 - AZOBR_RS13085 0.78 +0.2 2,763,116 + +0.0 2,763,116 + +0.3 2,763,116 + -0.3
Or see this region's nucleotide sequence