Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS12070 and AZOBR_RS12075 are separated by 113 nucleotides AZOBR_RS12075 and AZOBR_RS12080 are separated by 47 nucleotides
AZOBR_RS12070: AZOBR_RS12070 - peptidoglycan-binding protein, at 2,537,308 to 2,538,474
_RS12070
AZOBR_RS12075: AZOBR_RS12075 - hypothetical protein, at 2,538,588 to 2,539,130
_RS12075
AZOBR_RS12080: AZOBR_RS12080 - hypothetical protein, at 2,539,178 to 2,539,471
_RS12080
Position (kb)
2538
2539
2540 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2537.995 kb on + strand, within AZOBR_RS12070 at 2537.995 kb on + strand, within AZOBR_RS12070 at 2537.996 kb on - strand, within AZOBR_RS12070 at 2538.127 kb on + strand, within AZOBR_RS12070 at 2538.135 kb on - strand, within AZOBR_RS12070 at 2538.136 kb on + strand, within AZOBR_RS12070 at 2538.136 kb on + strand, within AZOBR_RS12070 at 2538.136 kb on + strand, within AZOBR_RS12070 at 2538.136 kb on + strand, within AZOBR_RS12070 at 2538.136 kb on + strand, within AZOBR_RS12070 at 2538.137 kb on - strand, within AZOBR_RS12070 at 2538.137 kb on - strand, within AZOBR_RS12070 at 2538.137 kb on - strand, within AZOBR_RS12070 at 2538.137 kb on - strand, within AZOBR_RS12070 at 2538.137 kb on - strand, within AZOBR_RS12070 at 2538.137 kb on - strand, within AZOBR_RS12070 at 2538.137 kb on - strand, within AZOBR_RS12070 at 2538.151 kb on - strand, within AZOBR_RS12070 at 2538.397 kb on + strand at 2538.397 kb on + strand at 2538.398 kb on - strand at 2538.398 kb on - strand at 2538.398 kb on - strand at 2538.398 kb on - strand at 2538.631 kb on + strand at 2538.631 kb on + strand at 2538.631 kb on + strand at 2538.631 kb on + strand at 2538.632 kb on - strand at 2538.632 kb on - strand at 2538.632 kb on - strand at 2538.632 kb on - strand at 2538.697 kb on + strand, within AZOBR_RS12075 at 2538.697 kb on + strand, within AZOBR_RS12075 at 2538.697 kb on + strand, within AZOBR_RS12075 at 2538.698 kb on - strand, within AZOBR_RS12075 at 2538.817 kb on + strand, within AZOBR_RS12075 at 2539.070 kb on - strand, within AZOBR_RS12075 at 2539.070 kb on - strand, within AZOBR_RS12075 at 2539.070 kb on - strand, within AZOBR_RS12075 at 2539.143 kb on + strand at 2539.144 kb on - strand at 2539.342 kb on - strand, within AZOBR_RS12080 at 2539.342 kb on - strand, within AZOBR_RS12080 at 2539.342 kb on - strand, within AZOBR_RS12080
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 2,537,995 + AZOBR_RS12070 0.59 +0.4 2,537,995 + AZOBR_RS12070 0.59 -2.9 2,537,996 - AZOBR_RS12070 0.59 -2.8 2,538,127 + AZOBR_RS12070 0.70 -0.3 2,538,135 - AZOBR_RS12070 0.71 -2.0 2,538,136 + AZOBR_RS12070 0.71 +0.4 2,538,136 + AZOBR_RS12070 0.71 -0.0 2,538,136 + AZOBR_RS12070 0.71 -0.1 2,538,136 + AZOBR_RS12070 0.71 -1.8 2,538,136 + AZOBR_RS12070 0.71 -0.8 2,538,137 - AZOBR_RS12070 0.71 -0.2 2,538,137 - AZOBR_RS12070 0.71 +0.2 2,538,137 - AZOBR_RS12070 0.71 -0.3 2,538,137 - AZOBR_RS12070 0.71 -1.1 2,538,137 - AZOBR_RS12070 0.71 +1.6 2,538,137 - AZOBR_RS12070 0.71 -0.2 2,538,137 - AZOBR_RS12070 0.71 +0.3 2,538,151 - AZOBR_RS12070 0.72 -2.1 2,538,397 + -1.4 2,538,397 + -3.3 2,538,398 - +1.6 2,538,398 - +0.2 2,538,398 - -1.7 2,538,398 - +0.7 2,538,631 + +0.8 2,538,631 + -0.1 2,538,631 + -2.1 2,538,631 + +1.0 2,538,632 - -0.2 2,538,632 - -3.7 2,538,632 - -0.0 2,538,632 - +0.4 2,538,697 + AZOBR_RS12075 0.20 +0.3 2,538,697 + AZOBR_RS12075 0.20 -0.1 2,538,697 + AZOBR_RS12075 0.20 +0.6 2,538,698 - AZOBR_RS12075 0.20 -2.8 2,538,817 + AZOBR_RS12075 0.42 -0.1 2,539,070 - AZOBR_RS12075 0.89 +0.4 2,539,070 - AZOBR_RS12075 0.89 -1.7 2,539,070 - AZOBR_RS12075 0.89 -1.8 2,539,143 + -0.3 2,539,144 - +0.5 2,539,342 - AZOBR_RS12080 0.56 +0.4 2,539,342 - AZOBR_RS12080 0.56 +0.2 2,539,342 - AZOBR_RS12080 0.56 +0.8
Or see this region's nucleotide sequence