Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS11880
Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,497,810 | + | GFF2272 | 0.57 | +1.4 | |
2,497,810 | + | GFF2272 | 0.57 | +0.1 | |
2,498,997 | - | AZOBR_RS11880 | 0.33 | -0.1 | |
2,499,236 | + | AZOBR_RS11880 | 0.54 | -1.3 | |
2,499,236 | + | AZOBR_RS11880 | 0.54 | -1.7 | |
2,499,237 | - | AZOBR_RS11880 | 0.54 | +0.1 | |
2,499,321 | - | AZOBR_RS11880 | 0.61 | +0.3 | |
2,499,321 | - | AZOBR_RS11880 | 0.61 | -0.4 | |
2,499,572 | + | AZOBR_RS11880 | 0.83 | +0.3 | |
2,499,572 | + | AZOBR_RS11880 | 0.83 | +0.4 | |
2,499,572 | + | AZOBR_RS11880 | 0.83 | +0.8 | |
2,499,572 | + | AZOBR_RS11880 | 0.83 | -0.5 | |
2,499,572 | + | AZOBR_RS11880 | 0.83 | -0.2 | |
2,499,573 | - | AZOBR_RS11880 | 0.83 | -2.0 | |
2,499,573 | - | AZOBR_RS11880 | 0.83 | +1.2 | |
2,499,573 | - | AZOBR_RS11880 | 0.83 | +0.2 | |
2,499,579 | - | AZOBR_RS11880 | 0.83 | +0.0 | |
2,499,771 | - | -0.0 | |||
2,499,771 | - | +0.1 | |||
2,499,947 | - | -1.7 | |||
2,499,947 | - | -1.2 | |||
2,499,952 | + | -2.9 |
Or see this region's nucleotide sequence