Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS10705 and AZOBR_RS10710 are separated by 137 nucleotides
AZOBR_RS10705: AZOBR_RS10705 - hypothetical protein, at 2,248,628 to 2,249,764
_RS10705
AZOBR_RS10710: AZOBR_RS10710 - radical SAM domain-containing protein, at 2,249,902 to 2,250,918
_RS10710
Position (kb)
2248
2249
2250 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2248.603 kb on + strand at 2248.604 kb on - strand at 2248.689 kb on + strand at 2248.689 kb on + strand at 2248.690 kb on - strand at 2248.690 kb on - strand at 2248.690 kb on - strand at 2248.690 kb on - strand at 2248.690 kb on - strand at 2248.692 kb on + strand at 2248.692 kb on + strand at 2248.693 kb on - strand at 2248.857 kb on + strand, within AZOBR_RS10705 at 2248.899 kb on + strand, within AZOBR_RS10705 at 2249.133 kb on + strand, within AZOBR_RS10705 at 2249.134 kb on - strand, within AZOBR_RS10705 at 2249.157 kb on + strand, within AZOBR_RS10705 at 2249.158 kb on - strand, within AZOBR_RS10705 at 2249.158 kb on - strand, within AZOBR_RS10705 at 2249.734 kb on - strand at 2249.842 kb on + strand at 2249.843 kb on - strand at 2249.843 kb on - strand at 2249.864 kb on + strand at 2249.864 kb on + strand at 2249.864 kb on + strand at 2249.864 kb on + strand at 2249.864 kb on + strand at 2249.865 kb on - strand at 2249.865 kb on - strand at 2250.184 kb on + strand, within AZOBR_RS10710 at 2250.184 kb on + strand, within AZOBR_RS10710 at 2250.184 kb on + strand, within AZOBR_RS10710 at 2250.184 kb on + strand, within AZOBR_RS10710 at 2250.185 kb on - strand, within AZOBR_RS10710 at 2250.356 kb on - strand, within AZOBR_RS10710 at 2250.376 kb on + strand, within AZOBR_RS10710 at 2250.376 kb on + strand, within AZOBR_RS10710 at 2250.376 kb on + strand, within AZOBR_RS10710 at 2250.376 kb on + strand, within AZOBR_RS10710 at 2250.377 kb on - strand, within AZOBR_RS10710 at 2250.377 kb on - strand, within AZOBR_RS10710 at 2250.434 kb on - strand, within AZOBR_RS10710 at 2250.434 kb on - strand, within AZOBR_RS10710
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 2,248,603 + -2.0 2,248,604 - +0.5 2,248,689 + +1.6 2,248,689 + -3.8 2,248,690 - -0.6 2,248,690 - +0.2 2,248,690 - +0.0 2,248,690 - +0.4 2,248,690 - +0.9 2,248,692 + -0.2 2,248,692 + -1.8 2,248,693 - +1.4 2,248,857 + AZOBR_RS10705 0.20 -0.2 2,248,899 + AZOBR_RS10705 0.24 +0.9 2,249,133 + AZOBR_RS10705 0.44 -1.5 2,249,134 - AZOBR_RS10705 0.45 -1.1 2,249,157 + AZOBR_RS10705 0.47 -0.3 2,249,158 - AZOBR_RS10705 0.47 -3.7 2,249,158 - AZOBR_RS10705 0.47 -0.8 2,249,734 - +0.3 2,249,842 + -0.1 2,249,843 - +0.2 2,249,843 - +0.6 2,249,864 + -0.6 2,249,864 + -0.6 2,249,864 + -0.2 2,249,864 + -0.7 2,249,864 + -0.1 2,249,865 - -0.5 2,249,865 - -2.7 2,250,184 + AZOBR_RS10710 0.28 +0.7 2,250,184 + AZOBR_RS10710 0.28 -2.5 2,250,184 + AZOBR_RS10710 0.28 +1.0 2,250,184 + AZOBR_RS10710 0.28 -0.3 2,250,185 - AZOBR_RS10710 0.28 +0.4 2,250,356 - AZOBR_RS10710 0.45 +0.0 2,250,376 + AZOBR_RS10710 0.47 -1.9 2,250,376 + AZOBR_RS10710 0.47 +1.4 2,250,376 + AZOBR_RS10710 0.47 +0.7 2,250,376 + AZOBR_RS10710 0.47 +0.8 2,250,377 - AZOBR_RS10710 0.47 +0.0 2,250,377 - AZOBR_RS10710 0.47 +0.0 2,250,434 - AZOBR_RS10710 0.52 -2.2 2,250,434 - AZOBR_RS10710 0.52 -0.4
Or see this region's nucleotide sequence