Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS10610 and AZOBR_RS10615 are separated by 18 nucleotides AZOBR_RS10615 and AZOBR_RS10620 are separated by 330 nucleotides AZOBR_RS10620 and AZOBR_RS10625 are separated by 231 nucleotides
AZOBR_RS10610: AZOBR_RS10610 - hypothetical protein, at 2,227,787 to 2,229,862
_RS10610
AZOBR_RS10615: AZOBR_RS10615 - exported protein of unknown function, at 2,229,881 to 2,230,534
_RS10615
AZOBR_RS10620: AZOBR_RS10620 - membrane protein, at 2,230,865 to 2,231,029
_RS10620
AZOBR_RS10625: AZOBR_RS10625 - RNA polymerase sigma-70 factor, at 2,231,261 to 2,231,749
_RS10625
Position (kb)
2229
2230
2231 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2229.089 kb on + strand, within AZOBR_RS10610 at 2229.102 kb on + strand, within AZOBR_RS10610 at 2229.102 kb on + strand, within AZOBR_RS10610 at 2229.103 kb on - strand, within AZOBR_RS10610 at 2229.103 kb on - strand, within AZOBR_RS10610 at 2229.103 kb on - strand, within AZOBR_RS10610 at 2229.365 kb on + strand, within AZOBR_RS10610 at 2229.365 kb on + strand, within AZOBR_RS10610 at 2229.365 kb on + strand, within AZOBR_RS10610 at 2229.488 kb on + strand, within AZOBR_RS10610 at 2229.489 kb on - strand, within AZOBR_RS10610 at 2229.797 kb on + strand at 2229.798 kb on - strand at 2229.966 kb on + strand, within AZOBR_RS10615 at 2229.966 kb on + strand, within AZOBR_RS10615 at 2229.967 kb on - strand, within AZOBR_RS10615 at 2229.967 kb on - strand, within AZOBR_RS10615 at 2229.967 kb on - strand, within AZOBR_RS10615 at 2230.023 kb on + strand, within AZOBR_RS10615 at 2230.023 kb on + strand, within AZOBR_RS10615 at 2230.023 kb on + strand, within AZOBR_RS10615 at 2230.023 kb on + strand, within AZOBR_RS10615 at 2230.024 kb on - strand, within AZOBR_RS10615 at 2230.218 kb on + strand, within AZOBR_RS10615 at 2230.218 kb on + strand, within AZOBR_RS10615 at 2230.219 kb on - strand, within AZOBR_RS10615 at 2230.219 kb on - strand, within AZOBR_RS10615 at 2230.236 kb on + strand, within AZOBR_RS10615 at 2230.236 kb on + strand, within AZOBR_RS10615 at 2230.236 kb on + strand, within AZOBR_RS10615 at 2230.237 kb on - strand, within AZOBR_RS10615 at 2230.237 kb on - strand, within AZOBR_RS10615 at 2230.237 kb on - strand, within AZOBR_RS10615 at 2230.254 kb on + strand, within AZOBR_RS10615 at 2230.254 kb on + strand, within AZOBR_RS10615 at 2230.254 kb on + strand, within AZOBR_RS10615 at 2230.255 kb on - strand, within AZOBR_RS10615 at 2230.255 kb on - strand, within AZOBR_RS10615 at 2230.435 kb on - strand, within AZOBR_RS10615 at 2230.462 kb on - strand, within AZOBR_RS10615 at 2230.462 kb on - strand, within AZOBR_RS10615 at 2230.724 kb on + strand at 2231.216 kb on - strand at 2231.221 kb on + strand at 2231.379 kb on + strand, within AZOBR_RS10625 at 2231.380 kb on - strand, within AZOBR_RS10625
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 2,229,089 + AZOBR_RS10610 0.63 +0.8 2,229,102 + AZOBR_RS10610 0.63 +0.6 2,229,102 + AZOBR_RS10610 0.63 +0.7 2,229,103 - AZOBR_RS10610 0.63 -2.4 2,229,103 - AZOBR_RS10610 0.63 -1.6 2,229,103 - AZOBR_RS10610 0.63 +0.9 2,229,365 + AZOBR_RS10610 0.76 +1.6 2,229,365 + AZOBR_RS10610 0.76 -2.8 2,229,365 + AZOBR_RS10610 0.76 -1.0 2,229,488 + AZOBR_RS10610 0.82 +0.0 2,229,489 - AZOBR_RS10610 0.82 -0.3 2,229,797 + +1.8 2,229,798 - +0.3 2,229,966 + AZOBR_RS10615 0.13 +0.9 2,229,966 + AZOBR_RS10615 0.13 +0.1 2,229,967 - AZOBR_RS10615 0.13 -4.4 2,229,967 - AZOBR_RS10615 0.13 -0.4 2,229,967 - AZOBR_RS10615 0.13 +0.6 2,230,023 + AZOBR_RS10615 0.22 +0.8 2,230,023 + AZOBR_RS10615 0.22 +1.3 2,230,023 + AZOBR_RS10615 0.22 +0.0 2,230,023 + AZOBR_RS10615 0.22 +0.3 2,230,024 - AZOBR_RS10615 0.22 +0.1 2,230,218 + AZOBR_RS10615 0.52 +1.2 2,230,218 + AZOBR_RS10615 0.52 +0.3 2,230,219 - AZOBR_RS10615 0.52 -0.4 2,230,219 - AZOBR_RS10615 0.52 +0.6 2,230,236 + AZOBR_RS10615 0.54 +1.1 2,230,236 + AZOBR_RS10615 0.54 +1.3 2,230,236 + AZOBR_RS10615 0.54 +0.4 2,230,237 - AZOBR_RS10615 0.54 +2.5 2,230,237 - AZOBR_RS10615 0.54 +1.2 2,230,237 - AZOBR_RS10615 0.54 +0.0 2,230,254 + AZOBR_RS10615 0.57 -0.4 2,230,254 + AZOBR_RS10615 0.57 -0.3 2,230,254 + AZOBR_RS10615 0.57 -3.4 2,230,255 - AZOBR_RS10615 0.57 -4.2 2,230,255 - AZOBR_RS10615 0.57 -0.4 2,230,435 - AZOBR_RS10615 0.85 +0.1 2,230,462 - AZOBR_RS10615 0.89 +0.5 2,230,462 - AZOBR_RS10615 0.89 -3.4 2,230,724 + +1.1 2,231,216 - -2.6 2,231,221 + +0.2 2,231,379 + AZOBR_RS10625 0.24 +0.0 2,231,380 - AZOBR_RS10625 0.24 +0.9
Or see this region's nucleotide sequence