Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS07750

Experiment: D-Cycloserine 0.125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS07745 and AZOBR_RS07750 are separated by 92 nucleotidesAZOBR_RS07750 and AZOBR_RS07755 are separated by 106 nucleotides AZOBR_RS07745: AZOBR_RS07745 - membrane protein, at 1,635,212 to 1,635,496 _RS07745 AZOBR_RS07750: AZOBR_RS07750 - dihydroorotate dehydrogenase, at 1,635,589 to 1,635,903 _RS07750 AZOBR_RS07755: AZOBR_RS07755 - MFS transporter, at 1,636,010 to 1,637,239 _RS07755 Position (kb) 1635 1636Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1634.794 kb on - strandat 1634.794 kb on - strandat 1634.829 kb on + strandat 1634.829 kb on + strandat 1634.830 kb on - strandat 1634.877 kb on + strandat 1634.877 kb on + strandat 1634.877 kb on + strandat 1634.877 kb on + strandat 1634.877 kb on + strandat 1634.979 kb on + strandat 1634.979 kb on + strandat 1635.048 kb on - strandat 1635.569 kb on + strandat 1635.569 kb on + strandat 1635.570 kb on - strandat 1635.570 kb on - strandat 1635.608 kb on - strandat 1635.713 kb on - strand, within AZOBR_RS07750at 1635.713 kb on - strand, within AZOBR_RS07750at 1635.713 kb on - strand, within AZOBR_RS07750at 1635.820 kb on + strand, within AZOBR_RS07750at 1635.820 kb on + strand, within AZOBR_RS07750at 1635.820 kb on + strand, within AZOBR_RS07750at 1635.820 kb on + strand, within AZOBR_RS07750at 1635.820 kb on + strand, within AZOBR_RS07750at 1635.821 kb on - strand, within AZOBR_RS07750at 1635.821 kb on - strand, within AZOBR_RS07750at 1635.871 kb on + strand, within AZOBR_RS07750at 1635.871 kb on + strand, within AZOBR_RS07750at 1635.872 kb on - strandat 1636.361 kb on + strand, within AZOBR_RS07755at 1636.361 kb on + strand, within AZOBR_RS07755at 1636.362 kb on - strand, within AZOBR_RS07755at 1636.362 kb on - strand, within AZOBR_RS07755at 1636.424 kb on + strand, within AZOBR_RS07755at 1636.790 kb on + strand, within AZOBR_RS07755at 1636.791 kb on - strand, within AZOBR_RS07755at 1636.791 kb on - strand, within AZOBR_RS07755at 1636.841 kb on + strand, within AZOBR_RS07755at 1636.841 kb on + strand, within AZOBR_RS07755at 1636.842 kb on - strand, within AZOBR_RS07755at 1636.859 kb on + strand, within AZOBR_RS07755at 1636.859 kb on + strand, within AZOBR_RS07755at 1636.859 kb on + strand, within AZOBR_RS07755at 1636.860 kb on - strand, within AZOBR_RS07755at 1636.860 kb on - strand, within AZOBR_RS07755at 1636.860 kb on - strand, within AZOBR_RS07755

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml
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1,634,794 - +0.3
1,634,794 - -2.4
1,634,829 + -0.5
1,634,829 + +0.7
1,634,830 - +0.3
1,634,877 + -0.3
1,634,877 + +0.9
1,634,877 + +0.3
1,634,877 + +1.2
1,634,877 + -0.4
1,634,979 + +1.4
1,634,979 + +0.7
1,635,048 - +0.1
1,635,569 + +1.4
1,635,569 + -0.1
1,635,570 - -0.2
1,635,570 - +0.8
1,635,608 - +0.1
1,635,713 - AZOBR_RS07750 0.39 +0.1
1,635,713 - AZOBR_RS07750 0.39 +1.5
1,635,713 - AZOBR_RS07750 0.39 +0.1
1,635,820 + AZOBR_RS07750 0.73 +0.1
1,635,820 + AZOBR_RS07750 0.73 +2.0
1,635,820 + AZOBR_RS07750 0.73 +0.7
1,635,820 + AZOBR_RS07750 0.73 +3.7
1,635,820 + AZOBR_RS07750 0.73 -1.0
1,635,821 - AZOBR_RS07750 0.74 +1.3
1,635,821 - AZOBR_RS07750 0.74 -0.2
1,635,871 + AZOBR_RS07750 0.90 -0.0
1,635,871 + AZOBR_RS07750 0.90 +1.0
1,635,872 - -0.7
1,636,361 + AZOBR_RS07755 0.29 +0.3
1,636,361 + AZOBR_RS07755 0.29 +0.3
1,636,362 - AZOBR_RS07755 0.29 -0.6
1,636,362 - AZOBR_RS07755 0.29 -0.1
1,636,424 + AZOBR_RS07755 0.34 -3.1
1,636,790 + AZOBR_RS07755 0.63 -0.5
1,636,791 - AZOBR_RS07755 0.63 +0.5
1,636,791 - AZOBR_RS07755 0.63 +0.9
1,636,841 + AZOBR_RS07755 0.68 -1.8
1,636,841 + AZOBR_RS07755 0.68 +1.9
1,636,842 - AZOBR_RS07755 0.68 -2.8
1,636,859 + AZOBR_RS07755 0.69 -3.1
1,636,859 + AZOBR_RS07755 0.69 -1.8
1,636,859 + AZOBR_RS07755 0.69 +0.3
1,636,860 - AZOBR_RS07755 0.69 -0.0
1,636,860 - AZOBR_RS07755 0.69 +0.7
1,636,860 - AZOBR_RS07755 0.69 +0.2

Or see this region's nucleotide sequence