Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS07030

Experiment: D-Cycloserine 0.125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS07025 and AZOBR_RS07030 are separated by 78 nucleotidesAZOBR_RS07030 and AZOBR_RS07035 are separated by 119 nucleotides AZOBR_RS07025: AZOBR_RS07025 - methyltransferase, at 1,486,769 to 1,487,734 _RS07025 AZOBR_RS07030: AZOBR_RS07030 - hemerythrin, at 1,487,813 to 1,488,271 _RS07030 AZOBR_RS07035: AZOBR_RS07035 - dihydropteroate synthase, at 1,488,391 to 1,489,551 _RS07035 Position (kb) 1487 1488 1489Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1486.878 kb on - strand, within AZOBR_RS07025at 1486.878 kb on - strand, within AZOBR_RS07025at 1486.934 kb on + strand, within AZOBR_RS07025at 1487.087 kb on + strand, within AZOBR_RS07025at 1487.087 kb on + strand, within AZOBR_RS07025at 1487.087 kb on + strand, within AZOBR_RS07025at 1487.087 kb on + strand, within AZOBR_RS07025at 1487.087 kb on + strand, within AZOBR_RS07025at 1487.087 kb on + strand, within AZOBR_RS07025at 1487.087 kb on + strand, within AZOBR_RS07025at 1487.087 kb on + strand, within AZOBR_RS07025at 1487.087 kb on + strand, within AZOBR_RS07025at 1487.087 kb on + strand, within AZOBR_RS07025at 1487.088 kb on - strand, within AZOBR_RS07025at 1487.088 kb on - strand, within AZOBR_RS07025at 1487.088 kb on - strand, within AZOBR_RS07025at 1487.088 kb on - strand, within AZOBR_RS07025at 1487.088 kb on - strand, within AZOBR_RS07025at 1487.088 kb on - strand, within AZOBR_RS07025at 1487.088 kb on - strand, within AZOBR_RS07025at 1487.186 kb on + strand, within AZOBR_RS07025at 1487.187 kb on - strand, within AZOBR_RS07025at 1487.615 kb on + strand, within AZOBR_RS07025at 1487.615 kb on + strand, within AZOBR_RS07025at 1487.615 kb on + strand, within AZOBR_RS07025at 1487.621 kb on + strand, within AZOBR_RS07025at 1487.622 kb on - strand, within AZOBR_RS07025at 1487.966 kb on + strand, within AZOBR_RS07030at 1488.270 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml
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1,486,878 - AZOBR_RS07025 0.11 +0.5
1,486,878 - AZOBR_RS07025 0.11 -2.2
1,486,934 + AZOBR_RS07025 0.17 +1.7
1,487,087 + AZOBR_RS07025 0.33 -0.0
1,487,087 + AZOBR_RS07025 0.33 -3.3
1,487,087 + AZOBR_RS07025 0.33 -0.4
1,487,087 + AZOBR_RS07025 0.33 +0.3
1,487,087 + AZOBR_RS07025 0.33 +1.2
1,487,087 + AZOBR_RS07025 0.33 +2.1
1,487,087 + AZOBR_RS07025 0.33 -0.2
1,487,087 + AZOBR_RS07025 0.33 +0.9
1,487,087 + AZOBR_RS07025 0.33 +1.2
1,487,087 + AZOBR_RS07025 0.33 -0.2
1,487,088 - AZOBR_RS07025 0.33 +1.1
1,487,088 - AZOBR_RS07025 0.33 -0.7
1,487,088 - AZOBR_RS07025 0.33 -1.6
1,487,088 - AZOBR_RS07025 0.33 -0.7
1,487,088 - AZOBR_RS07025 0.33 +1.4
1,487,088 - AZOBR_RS07025 0.33 +0.4
1,487,088 - AZOBR_RS07025 0.33 -1.4
1,487,186 + AZOBR_RS07025 0.43 +0.2
1,487,187 - AZOBR_RS07025 0.43 -0.3
1,487,615 + AZOBR_RS07025 0.88 -1.2
1,487,615 + AZOBR_RS07025 0.88 +0.7
1,487,615 + AZOBR_RS07025 0.88 +1.0
1,487,621 + AZOBR_RS07025 0.88 -0.0
1,487,622 - AZOBR_RS07025 0.88 +0.7
1,487,966 + AZOBR_RS07030 0.33 -1.0
1,488,270 - -0.0

Or see this region's nucleotide sequence