Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07025 and AZOBR_RS07030 are separated by 78 nucleotides AZOBR_RS07030 and AZOBR_RS07035 are separated by 119 nucleotides
AZOBR_RS07025: AZOBR_RS07025 - methyltransferase, at 1,486,769 to 1,487,734
_RS07025
AZOBR_RS07030: AZOBR_RS07030 - hemerythrin, at 1,487,813 to 1,488,271
_RS07030
AZOBR_RS07035: AZOBR_RS07035 - dihydropteroate synthase, at 1,488,391 to 1,489,551
_RS07035
Position (kb)
1487
1488
1489 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1486.878 kb on - strand, within AZOBR_RS07025 at 1486.878 kb on - strand, within AZOBR_RS07025 at 1486.934 kb on + strand, within AZOBR_RS07025 at 1487.087 kb on + strand, within AZOBR_RS07025 at 1487.087 kb on + strand, within AZOBR_RS07025 at 1487.087 kb on + strand, within AZOBR_RS07025 at 1487.087 kb on + strand, within AZOBR_RS07025 at 1487.087 kb on + strand, within AZOBR_RS07025 at 1487.087 kb on + strand, within AZOBR_RS07025 at 1487.087 kb on + strand, within AZOBR_RS07025 at 1487.087 kb on + strand, within AZOBR_RS07025 at 1487.087 kb on + strand, within AZOBR_RS07025 at 1487.087 kb on + strand, within AZOBR_RS07025 at 1487.088 kb on - strand, within AZOBR_RS07025 at 1487.088 kb on - strand, within AZOBR_RS07025 at 1487.088 kb on - strand, within AZOBR_RS07025 at 1487.088 kb on - strand, within AZOBR_RS07025 at 1487.088 kb on - strand, within AZOBR_RS07025 at 1487.088 kb on - strand, within AZOBR_RS07025 at 1487.088 kb on - strand, within AZOBR_RS07025 at 1487.186 kb on + strand, within AZOBR_RS07025 at 1487.187 kb on - strand, within AZOBR_RS07025 at 1487.615 kb on + strand, within AZOBR_RS07025 at 1487.615 kb on + strand, within AZOBR_RS07025 at 1487.615 kb on + strand, within AZOBR_RS07025 at 1487.621 kb on + strand, within AZOBR_RS07025 at 1487.622 kb on - strand, within AZOBR_RS07025 at 1487.966 kb on + strand, within AZOBR_RS07030 at 1488.270 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 1,486,878 - AZOBR_RS07025 0.11 +0.5 1,486,878 - AZOBR_RS07025 0.11 -2.2 1,486,934 + AZOBR_RS07025 0.17 +1.7 1,487,087 + AZOBR_RS07025 0.33 -0.0 1,487,087 + AZOBR_RS07025 0.33 -3.3 1,487,087 + AZOBR_RS07025 0.33 -0.4 1,487,087 + AZOBR_RS07025 0.33 +0.3 1,487,087 + AZOBR_RS07025 0.33 +1.2 1,487,087 + AZOBR_RS07025 0.33 +2.1 1,487,087 + AZOBR_RS07025 0.33 -0.2 1,487,087 + AZOBR_RS07025 0.33 +0.9 1,487,087 + AZOBR_RS07025 0.33 +1.2 1,487,087 + AZOBR_RS07025 0.33 -0.2 1,487,088 - AZOBR_RS07025 0.33 +1.1 1,487,088 - AZOBR_RS07025 0.33 -0.7 1,487,088 - AZOBR_RS07025 0.33 -1.6 1,487,088 - AZOBR_RS07025 0.33 -0.7 1,487,088 - AZOBR_RS07025 0.33 +1.4 1,487,088 - AZOBR_RS07025 0.33 +0.4 1,487,088 - AZOBR_RS07025 0.33 -1.4 1,487,186 + AZOBR_RS07025 0.43 +0.2 1,487,187 - AZOBR_RS07025 0.43 -0.3 1,487,615 + AZOBR_RS07025 0.88 -1.2 1,487,615 + AZOBR_RS07025 0.88 +0.7 1,487,615 + AZOBR_RS07025 0.88 +1.0 1,487,621 + AZOBR_RS07025 0.88 -0.0 1,487,622 - AZOBR_RS07025 0.88 +0.7 1,487,966 + AZOBR_RS07030 0.33 -1.0 1,488,270 - -0.0
Or see this region's nucleotide sequence