Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS06745 and AZOBR_RS06750 are separated by 95 nucleotides AZOBR_RS06750 and AZOBR_RS06755 are separated by 143 nucleotides AZOBR_RS06755 and AZOBR_RS06760 are separated by 303 nucleotides AZOBR_RS06760 and AZOBR_RS06765 are separated by 138 nucleotides
AZOBR_RS06745: AZOBR_RS06745 - regulator, at 1,433,588 to 1,434,367
_RS06745
AZOBR_RS06750: AZOBR_RS06750 - transglycosylase, at 1,434,463 to 1,434,720
_RS06750
AZOBR_RS06755: AZOBR_RS06755 - ribulose-phosphate 3-epimerase, at 1,434,864 to 1,435,520
_RS06755
AZOBR_RS06760: AZOBR_RS06760 - molybdenum transport protein, at 1,435,824 to 1,436,243
_RS06760
AZOBR_RS06765: AZOBR_RS06765 - NADPH:quinone reductase, at 1,436,382 to 1,437,395
_RS06765
Position (kb) 1434
1435
1436 Strain fitness (log2 ratio) -1
0
1 at 1433.870 kb on + strand, within AZOBR_RS06745 at 1433.870 kb on + strand, within AZOBR_RS06745 at 1433.871 kb on - strand, within AZOBR_RS06745 at 1433.871 kb on - strand, within AZOBR_RS06745 at 1433.871 kb on - strand, within AZOBR_RS06745 at 1434.497 kb on + strand, within AZOBR_RS06750 at 1434.497 kb on + strand, within AZOBR_RS06750 at 1434.498 kb on - strand, within AZOBR_RS06750 at 1434.587 kb on + strand, within AZOBR_RS06750 at 1434.587 kb on + strand, within AZOBR_RS06750 at 1434.587 kb on + strand, within AZOBR_RS06750 at 1434.588 kb on - strand, within AZOBR_RS06750 at 1434.588 kb on - strand, within AZOBR_RS06750 at 1434.715 kb on - strand at 1434.720 kb on + strand at 1434.766 kb on + strand at 1434.767 kb on - strand at 1434.767 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 1,433,870 + AZOBR_RS06745 0.36 +0.5 1,433,870 + AZOBR_RS06745 0.36 -0.9 1,433,871 - AZOBR_RS06745 0.36 +1.3 1,433,871 - AZOBR_RS06745 0.36 +1.0 1,433,871 - AZOBR_RS06745 0.36 +0.3 1,434,497 + AZOBR_RS06750 0.13 +0.6 1,434,497 + AZOBR_RS06750 0.13 +0.8 1,434,498 - AZOBR_RS06750 0.14 +0.8 1,434,587 + AZOBR_RS06750 0.48 -0.5 1,434,587 + AZOBR_RS06750 0.48 +1.2 1,434,587 + AZOBR_RS06750 0.48 +0.7 1,434,588 - AZOBR_RS06750 0.48 +0.3 1,434,588 - AZOBR_RS06750 0.48 -0.4 1,434,715 - -1.2 1,434,720 + -1.4 1,434,766 + +1.5 1,434,767 - -0.4 1,434,767 - -0.7
Or see this region's nucleotide sequence