Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS06340 and AZOBR_RS06345 are separated by 77 nucleotides AZOBR_RS06345 and AZOBR_RS06350 are separated by 292 nucleotides AZOBR_RS06350 and AZOBR_RS06355 are separated by 129 nucleotides
AZOBR_RS06340: AZOBR_RS06340 - acyl-CoA synthetase, at 1,342,618 to 1,344,540
_RS06340
AZOBR_RS06345: AZOBR_RS06345 - hypothetical protein, at 1,344,618 to 1,344,914
_RS06345
AZOBR_RS06350: AZOBR_RS06350 - thiosulfate sulfurtransferase, at 1,345,207 to 1,346,139
_RS06350
AZOBR_RS06355: AZOBR_RS06355 - membrane protein, at 1,346,269 to 1,347,450
_RS06355
Position (kb)
1345
1346
1347 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1344.442 kb on + strand at 1344.926 kb on + strand at 1344.926 kb on + strand at 1344.926 kb on + strand at 1345.378 kb on + strand, within AZOBR_RS06350 at 1345.579 kb on + strand, within AZOBR_RS06350 at 1345.579 kb on + strand, within AZOBR_RS06350 at 1345.681 kb on + strand, within AZOBR_RS06350 at 1345.681 kb on + strand, within AZOBR_RS06350 at 1345.681 kb on + strand, within AZOBR_RS06350 at 1345.682 kb on - strand, within AZOBR_RS06350 at 1345.682 kb on - strand, within AZOBR_RS06350 at 1345.682 kb on - strand, within AZOBR_RS06350 at 1345.793 kb on - strand, within AZOBR_RS06350 at 1345.981 kb on + strand, within AZOBR_RS06350 at 1345.981 kb on + strand, within AZOBR_RS06350 at 1345.981 kb on + strand, within AZOBR_RS06350 at 1345.982 kb on - strand, within AZOBR_RS06350 at 1345.982 kb on - strand, within AZOBR_RS06350 at 1345.982 kb on - strand, within AZOBR_RS06350 at 1346.056 kb on + strand at 1346.057 kb on - strand at 1346.057 kb on - strand at 1346.118 kb on + strand at 1346.326 kb on + strand at 1346.515 kb on + strand, within AZOBR_RS06355 at 1346.516 kb on - strand, within AZOBR_RS06355 at 1346.764 kb on + strand, within AZOBR_RS06355 at 1346.764 kb on + strand, within AZOBR_RS06355 at 1346.764 kb on + strand, within AZOBR_RS06355 at 1346.764 kb on + strand, within AZOBR_RS06355 at 1346.765 kb on - strand, within AZOBR_RS06355 at 1346.765 kb on - strand, within AZOBR_RS06355 at 1346.765 kb on - strand, within AZOBR_RS06355 at 1346.765 kb on - strand, within AZOBR_RS06355 at 1346.974 kb on + strand, within AZOBR_RS06355
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 1,344,442 + -1.0 1,344,926 + -2.6 1,344,926 + -2.8 1,344,926 + -1.5 1,345,378 + AZOBR_RS06350 0.18 +0.2 1,345,579 + AZOBR_RS06350 0.40 -1.3 1,345,579 + AZOBR_RS06350 0.40 -0.2 1,345,681 + AZOBR_RS06350 0.51 -0.7 1,345,681 + AZOBR_RS06350 0.51 +0.8 1,345,681 + AZOBR_RS06350 0.51 -0.5 1,345,682 - AZOBR_RS06350 0.51 -1.7 1,345,682 - AZOBR_RS06350 0.51 -0.2 1,345,682 - AZOBR_RS06350 0.51 +0.7 1,345,793 - AZOBR_RS06350 0.63 -0.9 1,345,981 + AZOBR_RS06350 0.83 +0.1 1,345,981 + AZOBR_RS06350 0.83 -0.8 1,345,981 + AZOBR_RS06350 0.83 +2.9 1,345,982 - AZOBR_RS06350 0.83 -0.2 1,345,982 - AZOBR_RS06350 0.83 -0.8 1,345,982 - AZOBR_RS06350 0.83 -0.8 1,346,056 + +0.9 1,346,057 - +0.3 1,346,057 - +0.6 1,346,118 + -0.0 1,346,326 + -0.4 1,346,515 + AZOBR_RS06355 0.21 +0.6 1,346,516 - AZOBR_RS06355 0.21 +1.5 1,346,764 + AZOBR_RS06355 0.42 +0.6 1,346,764 + AZOBR_RS06355 0.42 +0.6 1,346,764 + AZOBR_RS06355 0.42 +1.2 1,346,764 + AZOBR_RS06355 0.42 +0.2 1,346,765 - AZOBR_RS06355 0.42 -1.3 1,346,765 - AZOBR_RS06355 0.42 +1.0 1,346,765 - AZOBR_RS06355 0.42 +0.5 1,346,765 - AZOBR_RS06355 0.42 +0.5 1,346,974 + AZOBR_RS06355 0.60 +0.8
Or see this region's nucleotide sequence