Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS06045 and AZOBR_RS06050 are separated by 230 nucleotides AZOBR_RS06050 and AZOBR_RS06055 are separated by 19 nucleotides AZOBR_RS06055 and AZOBR_RS06060 are separated by 44 nucleotides
AZOBR_RS06045: AZOBR_RS06045 - murein transglycosylase, at 1,282,666 to 1,283,976
_RS06045
AZOBR_RS06050: AZOBR_RS06050 - hypothetical protein, at 1,284,207 to 1,284,557
_RS06050
AZOBR_RS06055: AZOBR_RS06055 - hypothetical protein, at 1,284,577 to 1,285,362
_RS06055
AZOBR_RS06060: AZOBR_RS06060 - membrane protein, at 1,285,407 to 1,288,049
_RS06060
Position (kb)
1284
1285 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1283.456 kb on + strand, within AZOBR_RS06045 at 1283.456 kb on + strand, within AZOBR_RS06045 at 1283.654 kb on + strand at 1283.655 kb on - strand, within AZOBR_RS06045 at 1284.016 kb on + strand at 1284.016 kb on + strand at 1284.069 kb on + strand at 1284.069 kb on + strand at 1284.069 kb on + strand at 1284.070 kb on - strand at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.354 kb on + strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.355 kb on - strand, within AZOBR_RS06050 at 1284.453 kb on + strand, within AZOBR_RS06050 at 1284.512 kb on + strand, within AZOBR_RS06050 at 1284.513 kb on - strand, within AZOBR_RS06050 at 1284.555 kb on + strand at 1284.556 kb on - strand at 1284.556 kb on - strand at 1284.698 kb on - strand, within AZOBR_RS06055 at 1284.739 kb on + strand, within AZOBR_RS06055 at 1284.739 kb on + strand, within AZOBR_RS06055 at 1284.739 kb on + strand, within AZOBR_RS06055 at 1285.177 kb on + strand, within AZOBR_RS06055 at 1285.178 kb on - strand, within AZOBR_RS06055 at 1285.178 kb on - strand, within AZOBR_RS06055
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 1,283,456 + AZOBR_RS06045 0.60 -2.0 1,283,456 + AZOBR_RS06045 0.60 -0.1 1,283,654 + -1.3 1,283,655 - AZOBR_RS06045 0.75 -3.4 1,284,016 + +1.0 1,284,016 + -0.4 1,284,069 + +0.7 1,284,069 + +1.1 1,284,069 + +0.6 1,284,070 - +0.1 1,284,354 + AZOBR_RS06050 0.42 +1.0 1,284,354 + AZOBR_RS06050 0.42 -4.5 1,284,354 + AZOBR_RS06050 0.42 -1.9 1,284,354 + AZOBR_RS06050 0.42 -0.6 1,284,354 + AZOBR_RS06050 0.42 +0.4 1,284,354 + AZOBR_RS06050 0.42 -4.0 1,284,354 + AZOBR_RS06050 0.42 -1.9 1,284,355 - AZOBR_RS06050 0.42 +0.0 1,284,355 - AZOBR_RS06050 0.42 -0.2 1,284,355 - AZOBR_RS06050 0.42 -1.4 1,284,355 - AZOBR_RS06050 0.42 +0.4 1,284,355 - AZOBR_RS06050 0.42 +0.5 1,284,355 - AZOBR_RS06050 0.42 +1.0 1,284,355 - AZOBR_RS06050 0.42 +0.2 1,284,355 - AZOBR_RS06050 0.42 -0.1 1,284,355 - AZOBR_RS06050 0.42 +0.3 1,284,453 + AZOBR_RS06050 0.70 -3.6 1,284,512 + AZOBR_RS06050 0.87 -1.9 1,284,513 - AZOBR_RS06050 0.87 +0.9 1,284,555 + +0.2 1,284,556 - -0.5 1,284,556 - -0.4 1,284,698 - AZOBR_RS06055 0.15 -0.7 1,284,739 + AZOBR_RS06055 0.21 -0.1 1,284,739 + AZOBR_RS06055 0.21 -1.9 1,284,739 + AZOBR_RS06055 0.21 -1.6 1,285,177 + AZOBR_RS06055 0.76 -0.5 1,285,178 - AZOBR_RS06055 0.76 +1.2 1,285,178 - AZOBR_RS06055 0.76 +0.2
Or see this region's nucleotide sequence