Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS04720 and AZOBR_RS04725 overlap by 4 nucleotides AZOBR_RS04725 and AZOBR_RS04730 are separated by 53 nucleotides AZOBR_RS04730 and AZOBR_RS04735 are separated by 209 nucleotides AZOBR_RS04735 and AZOBR_RS04740 overlap by 20 nucleotides
AZOBR_RS04720: AZOBR_RS04720 - conserved exported protein of unknown function, at 994,712 to 995,329
_RS04720
AZOBR_RS04725: AZOBR_RS04725 - thioesterase, at 995,326 to 995,733
_RS04725
AZOBR_RS04730: AZOBR_RS04730 - hypothetical protein, at 995,787 to 997,193
_RS04730
AZOBR_RS04735: AZOBR_RS04735 - conserved membrane protein of unknown function, at 997,403 to 997,984
_RS04735
AZOBR_RS04740: AZOBR_RS04740 - acyl carrier protein, at 997,965 to 998,210
_RS04740
Position (kb) 995
996
997
998 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 995.008 kb on - strand, within AZOBR_RS04720 at 995.463 kb on - strand, within AZOBR_RS04725 at 995.543 kb on + strand, within AZOBR_RS04725 at 995.544 kb on - strand, within AZOBR_RS04725 at 995.649 kb on - strand, within AZOBR_RS04725 at 995.649 kb on - strand, within AZOBR_RS04725 at 995.657 kb on + strand, within AZOBR_RS04725 at 995.658 kb on - strand, within AZOBR_RS04725 at 995.658 kb on - strand, within AZOBR_RS04725 at 995.658 kb on - strand, within AZOBR_RS04725 at 995.658 kb on - strand, within AZOBR_RS04725 at 995.658 kb on - strand, within AZOBR_RS04725 at 995.696 kb on + strand at 995.697 kb on - strand at 995.697 kb on - strand at 995.697 kb on - strand at 995.697 kb on - strand at 996.089 kb on + strand, within AZOBR_RS04730 at 996.090 kb on - strand, within AZOBR_RS04730 at 996.090 kb on - strand, within AZOBR_RS04730 at 996.486 kb on - strand, within AZOBR_RS04730 at 996.898 kb on + strand, within AZOBR_RS04730 at 996.899 kb on - strand, within AZOBR_RS04730 at 997.479 kb on + strand, within AZOBR_RS04735 at 997.479 kb on + strand, within AZOBR_RS04735 at 997.480 kb on - strand, within AZOBR_RS04735 at 997.599 kb on + strand, within AZOBR_RS04735 at 997.599 kb on + strand, within AZOBR_RS04735 at 997.599 kb on + strand, within AZOBR_RS04735 at 997.599 kb on + strand, within AZOBR_RS04735 at 997.599 kb on + strand, within AZOBR_RS04735 at 997.600 kb on - strand, within AZOBR_RS04735 at 997.600 kb on - strand, within AZOBR_RS04735 at 997.723 kb on - strand, within AZOBR_RS04735 at 997.902 kb on + strand, within AZOBR_RS04735 at 997.966 kb on + strand at 997.966 kb on + strand at 997.966 kb on + strand at 997.966 kb on + strand at 997.966 kb on + strand at 997.967 kb on - strand at 997.967 kb on - strand at 998.191 kb on + strand at 998.192 kb on - strand at 998.192 kb on - strand at 998.192 kb on - strand at 998.192 kb on - strand at 998.192 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 995,008 - AZOBR_RS04720 0.48 -3.4 995,463 - AZOBR_RS04725 0.34 -0.5 995,543 + AZOBR_RS04725 0.53 -2.9 995,544 - AZOBR_RS04725 0.53 +2.8 995,649 - AZOBR_RS04725 0.79 -0.5 995,649 - AZOBR_RS04725 0.79 -3.7 995,657 + AZOBR_RS04725 0.81 +0.8 995,658 - AZOBR_RS04725 0.81 -0.5 995,658 - AZOBR_RS04725 0.81 +0.8 995,658 - AZOBR_RS04725 0.81 +0.2 995,658 - AZOBR_RS04725 0.81 -1.0 995,658 - AZOBR_RS04725 0.81 +0.5 995,696 + +0.0 995,697 - +1.1 995,697 - +0.4 995,697 - +0.8 995,697 - -1.1 996,089 + AZOBR_RS04730 0.21 +0.9 996,090 - AZOBR_RS04730 0.22 +0.8 996,090 - AZOBR_RS04730 0.22 -0.2 996,486 - AZOBR_RS04730 0.50 -0.2 996,898 + AZOBR_RS04730 0.79 -0.1 996,899 - AZOBR_RS04730 0.79 +0.7 997,479 + AZOBR_RS04735 0.13 +0.7 997,479 + AZOBR_RS04735 0.13 +0.9 997,480 - AZOBR_RS04735 0.13 -0.5 997,599 + AZOBR_RS04735 0.34 +1.7 997,599 + AZOBR_RS04735 0.34 -3.5 997,599 + AZOBR_RS04735 0.34 +1.7 997,599 + AZOBR_RS04735 0.34 -0.1 997,599 + AZOBR_RS04735 0.34 +1.6 997,600 - AZOBR_RS04735 0.34 +0.9 997,600 - AZOBR_RS04735 0.34 +0.5 997,723 - AZOBR_RS04735 0.55 +1.0 997,902 + AZOBR_RS04735 0.86 +1.3 997,966 + +0.9 997,966 + +1.0 997,966 + +1.8 997,966 + +1.4 997,966 + +0.1 997,967 - -0.8 997,967 - +1.0 998,191 + +0.8 998,192 - +1.2 998,192 - +0.5 998,192 - +0.2 998,192 - -1.6 998,192 - +1.2
Or see this region's nucleotide sequence