Experiment: D-Cycloserine 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03735 and AZOBR_RS03740 are separated by 374 nucleotides AZOBR_RS03740 and AZOBR_RS03745 are separated by 21 nucleotides
AZOBR_RS03735: AZOBR_RS03735 - hypothetical protein, at 786,615 to 787,226
_RS03735
AZOBR_RS03740: AZOBR_RS03740 - protein tyrosine phosphatase, at 787,601 to 788,179
_RS03740
AZOBR_RS03745: AZOBR_RS03745 - DNA polymerase, at 788,201 to 791,485
_RS03745
Position (kb) 787
788
789 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 786.807 kb on + strand, within AZOBR_RS03735 at 786.808 kb on - strand, within AZOBR_RS03735 at 786.808 kb on - strand, within AZOBR_RS03735 at 786.808 kb on - strand, within AZOBR_RS03735 at 786.828 kb on + strand, within AZOBR_RS03735 at 786.829 kb on - strand, within AZOBR_RS03735 at 787.048 kb on - strand, within AZOBR_RS03735 at 787.463 kb on + strand at 787.491 kb on + strand at 787.491 kb on + strand at 787.491 kb on + strand at 787.492 kb on - strand at 787.787 kb on + strand, within AZOBR_RS03740 at 787.787 kb on + strand, within AZOBR_RS03740 at 787.787 kb on + strand, within AZOBR_RS03740 at 787.787 kb on + strand, within AZOBR_RS03740 at 787.788 kb on - strand, within AZOBR_RS03740 at 787.788 kb on - strand, within AZOBR_RS03740 at 787.788 kb on - strand, within AZOBR_RS03740 at 787.788 kb on - strand, within AZOBR_RS03740 at 787.788 kb on - strand, within AZOBR_RS03740 at 788.099 kb on + strand, within AZOBR_RS03740 at 788.650 kb on - strand, within AZOBR_RS03745 at 789.097 kb on + strand, within AZOBR_RS03745
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.125 mg/ml remove 786,807 + AZOBR_RS03735 0.31 -0.2 786,808 - AZOBR_RS03735 0.32 +1.1 786,808 - AZOBR_RS03735 0.32 +0.1 786,808 - AZOBR_RS03735 0.32 +0.5 786,828 + AZOBR_RS03735 0.35 +0.4 786,829 - AZOBR_RS03735 0.35 -3.0 787,048 - AZOBR_RS03735 0.71 +0.8 787,463 + -0.4 787,491 + -0.8 787,491 + +2.3 787,491 + -1.9 787,492 - -0.2 787,787 + AZOBR_RS03740 0.32 -1.9 787,787 + AZOBR_RS03740 0.32 -1.3 787,787 + AZOBR_RS03740 0.32 +0.1 787,787 + AZOBR_RS03740 0.32 +1.6 787,788 - AZOBR_RS03740 0.32 -0.0 787,788 - AZOBR_RS03740 0.32 -1.0 787,788 - AZOBR_RS03740 0.32 -2.9 787,788 - AZOBR_RS03740 0.32 -2.1 787,788 - AZOBR_RS03740 0.32 -0.8 788,099 + AZOBR_RS03740 0.86 +0.4 788,650 - AZOBR_RS03745 0.14 -1.9 789,097 + AZOBR_RS03745 0.27 -2.1
Or see this region's nucleotide sequence